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Aliases for PIR60123 Gene

Subcategory (RNA class) for PIR60123 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR60123 Gene

No Aliases found

ORGUL Members for PIR60123 Gene

Previous GeneCards Identifiers for PIR60123 Gene

  • GC21P038884

No data available for External Ids for PIR60123 Gene

Summaries for PIR60123 Gene

GeneCards Summary for PIR60123 Gene

PIR60123 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60123 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60123 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60123 Gene

Genomics for PIR60123 Gene

GeneHancer (GH) Regulatory Elements for PIR60123 Gene

Promoters and enhancers for PIR60123 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J037513 Enhancer 0.4 UCNEbase 600.7 +1.0 1031 0.8 PIR60123 GC21M037562 PIR42486 DYRK1A
GH21J037533 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +20.4 20373 5.6 SP7 KLF14 SMARCA4 ZBED1 CREB1 GLIS2 PKNOX1 PRDM10 BACH1 ZIC2 ENSG00000242553 KCNJ6-AS1 DYRK1A PIGP PIR60123 PIR42486 GC21M037562
GH21J037537 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +24.6 24618 1.1 CC2D1A ZNF384 TRIM24 ZNF639 SMARCA4 MTA1 DPF2 IKZF1 PRDM10 ATF1 GC21M037562 PIR42486 PIR60123
GH21J037546 Enhancer 1.2 ENCODE dbSUPER 0.3 +34.9 34862 1.6 ZNF121 ZSCAN21 SP7 KLF14 PRDM1 MZF1 SMARCA4 ZNF331 PKNOX1 ZNF488 ENSG00000242553 DYRK1A KCNJ6-AS1 GC21M037562 PIR42486 PIR60123
GH21J037550 Enhancer 1.1 ENCODE dbSUPER 0.3 +41.5 41530 7 SP1 ELF3 CBFA2T2 ZNF121 MAFK TFE3 TRIM24 RELA CREM PRDM1 PIGP PIR42486 GC21M037562 PIR60123
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR60123 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60123 Gene

Genomic Locations for PIR60123 Gene
chr21:37,512,628-37,512,657
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr21:38,884,931-38,884,960
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR60123 Gene

Genes around PIR60123 on UCSC Golden Path with GeneCards custom track

PIR60123 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60123 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60123 Gene

Proteins for PIR60123 Gene

Post-translational modifications for PIR60123 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60123 Gene

Domains & Families for PIR60123 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60123 Gene

Function for PIR60123 Gene

Phenotypes From GWAS Catalog for PIR60123 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60123 Gene

Localization for PIR60123 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60123 Gene

Pathways & Interactions for PIR60123 Gene

PathCards logo

SuperPathways for PIR60123 Gene

No Data Available

Interacting Proteins for PIR60123 Gene

Gene Ontology (GO) - Biological Process for PIR60123 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60123 Gene

Drugs & Compounds for PIR60123 Gene

No Compound Related Data Available

Transcripts for PIR60123 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60123 Gene

No ASD Table

Relevant External Links for PIR60123 Gene

GeneLoc Exon Structure for
PIR60123

No data available for mRNA/cDNA for PIR60123 Gene

Expression for PIR60123 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60123 Gene

Orthologs for PIR60123 Gene

No data available for Orthologs and Evolution for PIR60123 Gene

Paralogs for PIR60123 Gene

No data available for Paralogs for PIR60123 Gene

Variants for PIR60123 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60123 Gene

Disorders for PIR60123 Gene

No disorders were found for PIR60123 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60123 Gene

Publications for PIR60123 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR60123 Gene

Products for PIR60123 Gene

Sources for PIR60123 Gene

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