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Aliases for PIR59957 Gene

Subcategory (RNA class) for PIR59957 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59957 Gene

No Aliases found

ORGUL Members for PIR59957 Gene

Previous GeneCards Identifiers for PIR59957 Gene

  • GC01P022779
  • GC01P022452

No data available for External Ids for PIR59957 Gene

Summaries for PIR59957 Gene

GeneCards Summary for PIR59957 Gene

PIR59957 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59957 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59957 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59957 Gene

Genomics for PIR59957 Gene

GeneHancer (GH) Regulatory Elements for PIR59957 Gene

Promoters and enhancers for PIR59957 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J022450 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 600.7 -0.1 -140 3.3 MTA3 ZNF652 SP1 CC2D1A ZFX ELF3 MNT SIX5 CBFA2T2 ZNF148 ZBTB40 PIR59957 KDM1A CDC42-IT1 ENSG00000271428 WNT4 USP48
GH01J022428 Promoter/Enhancer 1.8 EPDnew Ensembl ENCODE 0.3 -22.9 -22946 1.6 SP1 ELF3 SIX5 CBFA2T2 NKRF MLLT1 ELF1 PPARG PRDM10 ZNF143 ZBTB40 RAP1GAP PIR59957
GH01J022446 Enhancer 0.8 Ensembl ENCODE 0.7 -3.7 -3714 3.3 CBFA2T2 FOSL2 CEBPA CTBP1 FOS FOSL1 POLR2A NCOR1 NR2F2 JUND WNT4 ZBTB40 PIR59957
GH01J022454 Enhancer 0.6 ENCODE 0.7 +2.6 2648 0.4 PRDM1 PRDM10 PKNOX1 ZNF316 SCRT2 ZSCAN5C MAFG GATA3 DPF2 MAFK GC01P022456 PIR59957 ZBTB40
GH01J022442 Enhancer 0.8 Ensembl ENCODE 0.4 -8.2 -8170 3.6 CBFA2T2 PPARG NR2C1 FOXA1 RARA TEAD3 NANOG POU5F1 CBFA2T3 WNT4 ZBTB40 USP48 PIR59957
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR59957 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59957 Gene

Genomic Locations for PIR59957 Gene
chr1:22,451,971-22,451,998
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr1:22,778,464-22,778,491
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR59957 Gene

Genes around PIR59957 on UCSC Golden Path with GeneCards custom track

PIR59957 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59957 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59957 Gene

Proteins for PIR59957 Gene

Post-translational modifications for PIR59957 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59957 Gene

Domains & Families for PIR59957 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59957 Gene

Function for PIR59957 Gene

Phenotypes From GWAS Catalog for PIR59957 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59957 Gene

Localization for PIR59957 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59957 Gene

Pathways & Interactions for PIR59957 Gene

PathCards logo

SuperPathways for PIR59957 Gene

No Data Available

Interacting Proteins for PIR59957 Gene

Gene Ontology (GO) - Biological Process for PIR59957 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59957 Gene

Drugs & Compounds for PIR59957 Gene

No Compound Related Data Available

Transcripts for PIR59957 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59957 Gene

No ASD Table

Relevant External Links for PIR59957 Gene

GeneLoc Exon Structure for
PIR59957

No data available for mRNA/cDNA for PIR59957 Gene

Expression for PIR59957 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59957 Gene

Orthologs for PIR59957 Gene

No data available for Orthologs and Evolution for PIR59957 Gene

Paralogs for PIR59957 Gene

No data available for Paralogs for PIR59957 Gene

Variants for PIR59957 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59957 Gene

Disorders for PIR59957 Gene

No disorders were found for PIR59957 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59957 Gene

Publications for PIR59957 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR59957 Gene

Products for PIR59957 Gene

Sources for PIR59957 Gene

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