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Aliases for PIR59834 Gene

Subcategory (RNA class) for PIR59834 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59834 Gene

No Aliases found

ORGUL Members for PIR59834 Gene

No data available for External Ids for PIR59834 Gene

Summaries for PIR59834 Gene

GeneCards Summary for PIR59834 Gene

PIR59834 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59834 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59834 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59834 Gene

Genomics for PIR59834 Gene

GeneHancer (GH) Regulatory Elements for PIR59834 Gene

Promoters and enhancers for PIR59834 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J013255 Enhancer 0.5 dbSUPER 650.7 -0.4 -447 2.4 POLR2A MNT ZIC2 ZNF18 PIR59834 PIR45166 LDLRAD4
GH18J013260 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.7 +3.7 3739 1.7 JUN SCRT2 PIR59834 ENSG00000279275 LDLRAD4
GH18J013264 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +10.5 10510 6.3 FOXA2 ZFP64 NR2F1 KLF4 RFX5 FOXA1 GATA3 HNF4A FOSL2 NR2F6 ENSG00000279275 PIR59834 LDLRAD4
GH18J013273 Enhancer 0.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.0 16985 1.1 CEP192 RNMT PTPN2 ENSG00000279275 PIR59834 LDLRAD4
GH18J013261 Enhancer 0.4 ENCODE dbSUPER 0.7 +4.7 4702 0.2 PIR59834 ENSG00000279275 LDLRAD4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59834 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59834 Gene

Genomic Locations for PIR59834 Gene
chr18:13,257,095-13,257,122
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr18:13,257,094-13,257,121
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR59834 Gene

Genes around PIR59834 on UCSC Golden Path with GeneCards custom track

PIR59834 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59834 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59834 Gene

Function for PIR59834 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59834 Gene

Localization for PIR59834 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59834 Gene

Pathways & Interactions for PIR59834 Gene

SuperPathways for PIR59834 Gene

No Data Available

Interacting Proteins for PIR59834 Gene

Gene Ontology (GO) - Biological Process for PIR59834 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59834 Gene

Drugs & Compounds for PIR59834 Gene

No Compound Related Data Available

Transcripts for PIR59834 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59834 Gene

No ASD Table

Relevant External Links for PIR59834 Gene

GeneLoc Exon Structure for
PIR59834

No data available for mRNA/cDNA for PIR59834 Gene

Expression for PIR59834 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59834 Gene

Orthologs for PIR59834 Gene

No data available for Orthologs and Evolution for PIR59834 Gene

Paralogs for PIR59834 Gene

No data available for Paralogs for PIR59834 Gene

Variants for PIR59834 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59834 Gene

Disorders for PIR59834 Gene

No disorders were found for PIR59834 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59834 Gene

Publications for PIR59834 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59834 Gene

Sources for PIR59834 Gene

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