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Aliases for PIR59833 Gene

Subcategory (RNA class) for PIR59833 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59833 Gene

No Aliases found

ORGUL Members for PIR59833 Gene

Previous GeneCards Identifiers for PIR59833 Gene

  • GC03M073599

No data available for External Ids for PIR59833 Gene

Summaries for PIR59833 Gene

GeneCards Summary for PIR59833 Gene

PIR59833 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59833 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59833 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59833 Gene

Genomics for PIR59833 Gene

GeneHancer (GH) Regulatory Elements for PIR59833 Gene

Promoters and enhancers for PIR59833 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J073545 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.7 +2.5 2455 4.4 JUND POLR2A ELF1 FOS PDZRN3 RNU7-119P RNU6-1270P PIR59833 LOC101927296
GH03J073551 Enhancer 0.6 dbSUPER 0.7 -2.2 -2247 1.9 INSM2 ZIC2 ZKSCAN1 OSR2 SREBF1 JUND ZSCAN5C FOS FOSL2 PDZRN3 RNU7-119P PIR59833 LOC101927296 GC03M073571
GH03J073555 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -7.4 -7432 5.2 FEZF1 MNT FOXA1 NR2F2 JUND POLR2A ZNF341 FOS MAFK SP7 RNU7-119P PIR59833 GC03M073571 LOC101927296 PDZRN3
GH03J073571 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -21.9 -21869 1.8 PKNOX1 FOXA2 FEZF1 ZNF48 CREM HMG20B SP5 ZBTB11 MIER2 PPARG RNU7-119P PDZRN3-AS1 PDZRN3 SHQ1 GC03M073571 PIR59833
GH03J073579 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -30.3 -30256 1.3 ZBTB21 ZNF843 JUND POLR2A ZNF692 SCRT2 ZNF629 FOS SHQ1 GC03M073571 PIR59833 PDZRN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59833 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59833 Gene

Genomic Locations for PIR59833 Gene
chr3:73,550,278-73,550,306
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr3:73,599,429-73,599,457
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR59833 Gene

Genes around PIR59833 on UCSC Golden Path with GeneCards custom track

PIR59833 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59833 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59833 Gene

Function for PIR59833 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59833 Gene

Localization for PIR59833 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59833 Gene

Pathways & Interactions for PIR59833 Gene

SuperPathways for PIR59833 Gene

No Data Available

Interacting Proteins for PIR59833 Gene

Gene Ontology (GO) - Biological Process for PIR59833 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59833 Gene

Drugs & Compounds for PIR59833 Gene

No Compound Related Data Available

Transcripts for PIR59833 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59833 Gene

No ASD Table

Relevant External Links for PIR59833 Gene

GeneLoc Exon Structure for
PIR59833

No data available for mRNA/cDNA for PIR59833 Gene

Expression for PIR59833 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59833 Gene

Orthologs for PIR59833 Gene

No data available for Orthologs and Evolution for PIR59833 Gene

Paralogs for PIR59833 Gene

No data available for Paralogs for PIR59833 Gene

Variants for PIR59833 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59833 Gene

Disorders for PIR59833 Gene

No disorders were found for PIR59833 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59833 Gene

Publications for PIR59833 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59833 Gene

Sources for PIR59833 Gene

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