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Aliases for PIR59826 Gene

Subcategory (RNA class) for PIR59826 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59826 Gene

No Aliases found

ORGUL Members for PIR59826 Gene

No data available for External Ids for PIR59826 Gene

Summaries for PIR59826 Gene

GeneCards Summary for PIR59826 Gene

PIR59826 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59826 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59826 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59826 Gene

Genomics for PIR59826 Gene

GeneHancer (GH) Regulatory Elements for PIR59826 Gene

Promoters and enhancers for PIR59826 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I008954 Enhancer 0.9 Ensembl ENCODE 550.8 -0.8 -772 1.3 MEIS2 PKNOX1 EBF1 IRF4 NFATC1 ATF7 PRDM10 IKZF2 NR2F1 TRIM22 PIR59826 ENSG00000199815 OXTR RAD18
GH03I008935 Enhancer 0.9 Ensembl ENCODE 0.4 -18.6 -18609 3.3 CTCF JUN SIN3A RAD21 RFX5 CTBP1 GATA3 POLR2A RCOR1 FOSL2 RAD18 OXTR ENSG00000199815 PIR59826
GH03I008960 Enhancer 0.4 Ensembl 0.8 +4.2 4196 0.2 SMARCE1 IKZF1 ENSG00000199815 PIR59826 RAD18
GH03I008959 Enhancer 0.4 Ensembl 0.8 +3.7 3696 0.4 ZNF189 IKZF1 PRDM1 ENSG00000199815 PIR59826 RAD18
GH03I008945 Enhancer 0.2 ENCODE 0.4 -9.8 -9838 0.7 OXTR RAD18 PIR59826 ENSG00000199815
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59826 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59826 Gene

Genomic Locations for PIR59826 Gene
chr3:8,955,905-8,955,931
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr3:8,997,589-8,997,615
(GRCh37/hg19)

Genomic View for PIR59826 Gene

Genes around PIR59826 on UCSC Golden Path with GeneCards custom track

PIR59826 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59826 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59826 Gene

Proteins for PIR59826 Gene

Post-translational modifications for PIR59826 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59826 Gene

Domains & Families for PIR59826 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59826 Gene

Function for PIR59826 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59826 Gene

Localization for PIR59826 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59826 Gene

Pathways & Interactions for PIR59826 Gene

SuperPathways for PIR59826 Gene

No Data Available

Interacting Proteins for PIR59826 Gene

Gene Ontology (GO) - Biological Process for PIR59826 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59826 Gene

Drugs & Compounds for PIR59826 Gene

No Compound Related Data Available

Transcripts for PIR59826 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59826 Gene

No ASD Table

Relevant External Links for PIR59826 Gene

GeneLoc Exon Structure for
PIR59826

No data available for mRNA/cDNA for PIR59826 Gene

Expression for PIR59826 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59826 Gene

Orthologs for PIR59826 Gene

No data available for Orthologs and Evolution for PIR59826 Gene

Paralogs for PIR59826 Gene

No data available for Paralogs for PIR59826 Gene

Variants for PIR59826 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59826 Gene

Disorders for PIR59826 Gene

No disorders were found for PIR59826 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59826 Gene

Publications for PIR59826 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59826 Gene

Sources for PIR59826 Gene

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