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Aliases for PIR59801 Gene

Subcategory (RNA class) for PIR59801 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59801 Gene

No Aliases found

ORGUL Members for PIR59801 Gene

Previous GeneCards Identifiers for PIR59801 Gene

  • GC0XP062592

No data available for External Ids for PIR59801 Gene

Summaries for PIR59801 Gene

GeneCards Summary for PIR59801 Gene

PIR59801 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59801 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59801 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59801 Gene

Genomics for PIR59801 Gene

GeneHancer (GH) Regulatory Elements for PIR59801 Gene

Promoters and enhancers for PIR59801 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ063433 Enhancer 0.8 ENCODE 0.2 +61.4 61436 2.3 PKNOX1 YY1 TCF12 ZNF766 EGR1 ZHX1 CAVIN1 ZBTB11 ZNF592 ZNF148 LOC100421109 SPIN4-AS1 MTMR8 PIR59801 LINC01278
GH0XJ063559 Promoter/Enhancer 1.4 Ensembl ENCODE 0.1 +187.9 187942 2.8 PKNOX1 ARID4B SIN3A ZNF2 ZNF48 YY1 GLIS2 ZFP91 RUNX3 ZNF518A LINC01278 PIR59801
GH0XJ063408 Enhancer 0.4 ENCODE 0.3 +35.5 35488 0.6 NANOG POU5F1 PIR59801 LINC01278
GH0XJ063424 Enhancer 0.4 ENCODE 0.2 +51.4 51377 0.2 JUND FOS PIR59801 LINC01278
GH0XJ063503 Enhancer 0.6 Ensembl ENCODE 0.1 +130.9 130929 1.2 SP1 PRDM1 LINC01278 PIR59801
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59801 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59801 Gene

Genomic Locations for PIR59801 Gene
chrX:63,372,859-63,372,889
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chrX:62,592,738-62,592,768
(GRCh37/hg19)
Size:
31 bases
Orientation:
Plus strand

Genomic View for PIR59801 Gene

Genes around PIR59801 on UCSC Golden Path with GeneCards custom track

PIR59801 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59801 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59801 Gene

Function for PIR59801 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59801 Gene

Localization for PIR59801 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59801 Gene

Pathways & Interactions for PIR59801 Gene

SuperPathways for PIR59801 Gene

No Data Available

Interacting Proteins for PIR59801 Gene

Gene Ontology (GO) - Biological Process for PIR59801 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59801 Gene

Drugs & Compounds for PIR59801 Gene

No Compound Related Data Available

Transcripts for PIR59801 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59801 Gene

No ASD Table

Relevant External Links for PIR59801 Gene

GeneLoc Exon Structure for
PIR59801

No data available for mRNA/cDNA for PIR59801 Gene

Expression for PIR59801 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59801 Gene

Orthologs for PIR59801 Gene

No data available for Orthologs and Evolution for PIR59801 Gene

Paralogs for PIR59801 Gene

No data available for Paralogs for PIR59801 Gene

Variants for PIR59801 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59801 Gene

Disorders for PIR59801 Gene

No disorders were found for PIR59801 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59801 Gene

Publications for PIR59801 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59801 Gene

Sources for PIR59801 Gene

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