Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR59793 Gene

Subcategory (RNA class) for PIR59793 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR59793 Gene

No Aliases found

ORGUL Members for PIR59793 Gene

No data available for External Ids for PIR59793 Gene

Summaries for PIR59793 Gene

GeneCards Summary for PIR59793 Gene

PIR59793 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59793 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59793

Additional gene information for PIR59793 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59793 Gene

Genomics for PIR59793 Gene

GeneHancer (GH) Regulatory Elements for PIR59793 Gene

Promoters and enhancers for PIR59793 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I005762 Enhancer 0.8 dbSUPER 550.8 -1.3 -1292 7.1 CTCF FOXA2 CEBPG RARA POLR2B LCORL GATA3 POLR2A NFATC1 CREM GC10M005764 PIR59793 GDI2 FBXO18 LOC105376384 NRBF2P5 FAM208B
GH10I005754 Enhancer 0.6 dbSUPER 0.4 +6.0 5986 6.8 ZNF121 ZNF316 POLR2A HLF CREB1 ATF7 MAFK EMSY ATF2 GDI2 ASB13 FAM208B FBXO18 PIR59793 GC10M005764 ENSG00000226647
GH10I005751 Enhancer 0.6 ENCODE 0.4 +11.9 11890 1.7 FOXA2 RXRA TAF1 MAX REST YY1 JUND ATF3 HNF4A GDI2 FBXO18 ENSG00000226647 GC10M005764 PIR59793 FAM208B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59793 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59793 Gene

Genomic Locations for PIR59793 Gene
chr10:5,764,330-5,764,360
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr10:5,806,293-5,806,323
(GRCh37/hg19)

Genomic View for PIR59793 Gene

Genes around PIR59793 on UCSC Golden Path with GeneCards custom track

PIR59793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59793 Gene

ORGUL Member Location for PIR59793 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59793 Gene

Proteins for PIR59793 Gene

Post-translational modifications for PIR59793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59793 Gene

Domains & Families for PIR59793 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59793 Gene

Function for PIR59793 Gene

Phenotypes From GWAS Catalog for PIR59793 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59793 Gene

Localization for PIR59793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59793 Gene

Pathways & Interactions for PIR59793 Gene

SuperPathways for PIR59793 Gene

No Data Available

Interacting Proteins for PIR59793 Gene

Gene Ontology (GO) - Biological Process for PIR59793 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59793 Gene

Drugs & Compounds for PIR59793 Gene

No Compound Related Data Available

Transcripts for PIR59793 Gene

fRNAdb Secondary structures for PIR59793 Gene

  • FR254163

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59793 Gene

No ASD Table

Relevant External Links for PIR59793 Gene

GeneLoc Exon Structure for
PIR59793

No data available for mRNA/cDNA for PIR59793 Gene

Expression for PIR59793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59793 Gene

Orthologs for PIR59793 Gene

No data available for Orthologs and Evolution for PIR59793 Gene

Paralogs for PIR59793 Gene

No data available for Paralogs for PIR59793 Gene

Variants for PIR59793 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59793 Gene

Disorders for PIR59793 Gene

No disorders were found for PIR59793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59793 Gene

Publications for PIR59793 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59793 Gene

Sources for PIR59793 Gene

Content
Loading form....