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Aliases for PIR59750 Gene

Subcategory (RNA class) for PIR59750 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59750 Gene

No Aliases found

Previous GeneCards Identifiers for PIR59750 Gene

  • GC19P001385
  • GC13M031250

No data available for External Ids for PIR59750 Gene

Summaries for PIR59750 Gene

GeneCards Summary for PIR59750 Gene

PIR59750 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59750 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59750

Additional gene information for PIR59750 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59750 Gene

Genomics for PIR59750 Gene

GeneHancer (GH) Regulatory Elements for PIR59750 Gene

Promoters and enhancers for PIR59750 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I030672 Enhancer 1.2 Ensembl ENCODE 550.8 +0.1 100 1.9 CLOCK ARID4B SIN3A YY1 CBX5 ZNF213 ZNF207 ZNF143 FOS SP3 PIR59750 TRN-GTT2-4 HMGB1 USPL1
GH13I030675 Enhancer 0.4 ENCODE 550.8 -1.4 -1435 0.2 HLF YY1 PIR59750 TRN-GTT2-4 USPL1 HMGB1 ENSG00000275788
GH13I030662 Enhancer 1 Ensembl ENCODE 0.4 +11.2 11216 1.2 HDGF PKNOX1 BMI1 BATF RAD21 KLF5 IRF4 ATF7 ETV6 BCLAF1 HMGB1 USPL1 PIR59750
GH13I030653 Enhancer 0.7 ENCODE 0.4 +19.6 19571 1.4 HDAC1 TEAD4 TAL1 ZBTB40 FOSL1 TCF12 NCOR1 CBFA2T2 IKZF2 RUNX3 PIR59750 USPL1
GH13I030627 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +46.2 46204 0.9 HDGF TRIM22 EBF1 ELF1 DPF2 ZNF217 BCL11A TARDBP IKZF1 NBN USPL1 PIR59750
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59750 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59750 Gene

Genomic Locations for PIR59750 Gene
chr13:30,673,973-30,674,004
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand
chr13:31,248,110-31,248,141
(GRCh37/hg19)

Genomic View for PIR59750 Gene

Genes around PIR59750 on UCSC Golden Path with GeneCards custom track

PIR59750 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59750 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59750 Gene

ORGUL Member Location for PIR59750 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59750 Gene

Proteins for PIR59750 Gene

Post-translational modifications for PIR59750 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59750 Gene

Domains & Families for PIR59750 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59750 Gene

Function for PIR59750 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59750 Gene

Localization for PIR59750 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59750 Gene

Pathways & Interactions for PIR59750 Gene

SuperPathways for PIR59750 Gene

No Data Available

Interacting Proteins for PIR59750 Gene

Gene Ontology (GO) - Biological Process for PIR59750 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59750 Gene

Drugs & Compounds for PIR59750 Gene

No Compound Related Data Available

Transcripts for PIR59750 Gene

fRNAdb Secondary structures for PIR59750 Gene

  • FR125666
  • FR115418
  • FR325429
  • FR216262
  • FR372219

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59750 Gene

No ASD Table

Relevant External Links for PIR59750 Gene

GeneLoc Exon Structure for
PIR59750

No data available for mRNA/cDNA for PIR59750 Gene

Expression for PIR59750 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59750 Gene

Orthologs for PIR59750 Gene

No data available for Orthologs and Evolution for PIR59750 Gene

Paralogs for PIR59750 Gene

No data available for Paralogs for PIR59750 Gene

Variants for PIR59750 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59750 Gene

Disorders for PIR59750 Gene

No disorders were found for PIR59750 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59750 Gene

Publications for PIR59750 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59750 Gene

Sources for PIR59750 Gene

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