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Aliases for PIR59727 Gene

Subcategory (RNA class) for PIR59727 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59727 Gene

No Aliases found

ORGUL Members for PIR59727 Gene

Previous GeneCards Identifiers for PIR59727 Gene

  • GC02P198572

No data available for External Ids for PIR59727 Gene

Summaries for PIR59727 Gene

GeneCards Summary for PIR59727 Gene

PIR59727 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59727 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59727 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59727 Gene

Genomics for PIR59727 Gene

GeneHancer (GH) Regulatory Elements for PIR59727 Gene

Promoters and enhancers for PIR59727 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J197704 Promoter/Enhancer 1.5 Ensembl ENCODE 650.7 -1.7 -1725 3.2 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 POLR2B MARS2 PIR59727 PLCL1 ENSG00000222017 GC02M197694
GH02J197707 Enhancer 0.7 ENCODE 650.7 +0.1 90 0.3 CTCF RB1 ARID4B CEBPG RAD21 SCRT2 ZNF143 SCRT1 ZNF654 ZNF189 PIR59727 RFTN2 MARS2 ENSG00000222017 GC02M197694
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59727 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59727 Gene

Genomic Locations for PIR59727 Gene
chr2:197,707,592-197,707,620
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr2:198,572,316-198,572,344
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR59727 Gene

Genes around PIR59727 on UCSC Golden Path with GeneCards custom track

PIR59727 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59727 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59727 Gene

Function for PIR59727 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59727 Gene

Localization for PIR59727 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59727 Gene

Pathways & Interactions for PIR59727 Gene

SuperPathways for PIR59727 Gene

No Data Available

Interacting Proteins for PIR59727 Gene

Gene Ontology (GO) - Biological Process for PIR59727 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59727 Gene

Drugs & Compounds for PIR59727 Gene

No Compound Related Data Available

Transcripts for PIR59727 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59727 Gene

No ASD Table

Relevant External Links for PIR59727 Gene

GeneLoc Exon Structure for
PIR59727

No data available for mRNA/cDNA for PIR59727 Gene

Expression for PIR59727 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59727 Gene

Orthologs for PIR59727 Gene

No data available for Orthologs and Evolution for PIR59727 Gene

Paralogs for PIR59727 Gene

No data available for Paralogs for PIR59727 Gene

Variants for PIR59727 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59727 Gene

Disorders for PIR59727 Gene

No disorders were found for PIR59727 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59727 Gene

Publications for PIR59727 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59727 Gene

Sources for PIR59727 Gene

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