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Aliases for PIR59721 Gene

Subcategory (RNA class) for PIR59721 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59721 Gene

No Aliases found

ORGUL Members for PIR59721 Gene

No data available for External Ids for PIR59721 Gene

Summaries for PIR59721 Gene

GeneCards Summary for PIR59721 Gene

PIR59721 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59721 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59721 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59721 Gene

Genomics for PIR59721 Gene

GeneHancer (GH) Regulatory Elements for PIR59721 Gene

Promoters and enhancers for PIR59721 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I027771 Enhancer 1.5 FANTOM5 Ensembl ENCODE 550.8 -1.9 -1931 2.6 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 SLC30A9 PIR59721 ZNF603P ZKSCAN4 ZKSCAN8 ZSCAN12 ZSCAN9 HIST1H4L ZKSCAN3 ZNF391 ZSCAN26
GH06I027776 Enhancer 1.2 FANTOM5 ENCODE 0.8 +2.5 2474 1.7 ARNT YY1 GTF3C2 ZNF766 E2F8 ARID2 RUNX3 NCOA1 ZNF592 MEF2D GC06P027803 PIR58221 TRX-CAT2-1 ZKSCAN8 ZSCAN12 ZKSCAN3 ZNF603P ZSCAN23 ZSCAN9 HIST1H4PS1
GH06I027770 Enhancer 0.4 ENCODE 0.8 -4.3 -4262 0.1 SP1 POLR2A POU5F1 ZNF603P HIST1H2AI HIST1H4PS1 HIST1H2BL HIST1H3J HIST1H4K PIR59721 LOC100131289
GH06I027762 Enhancer 0.4 ENCODE 0.4 -12.6 -12554 0.6 POLR2A ZBTB33 EZH2 LOC100131289 ZNF603P HIST1H4PS1 HIST1H2AI HIST1H2BL RNU6-471P PIR59721
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59721 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59721 Gene

Genomic Locations for PIR59721 Gene
chr6:27,775,169-27,775,199
(GRCh38/hg38)
Size:
31 bases
Orientation:
Plus strand
chr6:27,742,948-27,742,978
(GRCh37/hg19)

Genomic View for PIR59721 Gene

Genes around PIR59721 on UCSC Golden Path with GeneCards custom track

PIR59721 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59721 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59721 Gene

Proteins for PIR59721 Gene

Post-translational modifications for PIR59721 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59721 Gene

Domains & Families for PIR59721 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59721 Gene

Function for PIR59721 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59721 Gene

Localization for PIR59721 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59721 Gene

Pathways & Interactions for PIR59721 Gene

SuperPathways for PIR59721 Gene

No Data Available

Interacting Proteins for PIR59721 Gene

Gene Ontology (GO) - Biological Process for PIR59721 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59721 Gene

Drugs & Compounds for PIR59721 Gene

No Compound Related Data Available

Transcripts for PIR59721 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59721 Gene

No ASD Table

Relevant External Links for PIR59721 Gene

GeneLoc Exon Structure for
PIR59721

No data available for mRNA/cDNA for PIR59721 Gene

Expression for PIR59721 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59721 Gene

Orthologs for PIR59721 Gene

No data available for Orthologs and Evolution for PIR59721 Gene

Paralogs for PIR59721 Gene

No data available for Paralogs for PIR59721 Gene

Variants for PIR59721 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59721 Gene

Disorders for PIR59721 Gene

No disorders were found for PIR59721 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59721 Gene

Publications for PIR59721 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59721 Gene

Sources for PIR59721 Gene

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