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Aliases for PIR59656 Gene

Subcategory (RNA class) for PIR59656 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59656 Gene

No Aliases found

ORGUL Members for PIR59656 Gene

Previous GeneCards Identifiers for PIR59656 Gene

  • GC17M006359

No data available for External Ids for PIR59656 Gene

Summaries for PIR59656 Gene

GeneCards Summary for PIR59656 Gene

PIR59656 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59656 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59656 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59656 Gene

Genomics for PIR59656 Gene

GeneHancer (GH) Regulatory Elements for PIR59656 Gene

Promoters and enhancers for PIR59656 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J006456 Enhancer 1.2 Ensembl ENCODE dbSUPER 650.7 -1.2 -1243 2.4 PKNOX1 ATF1 SCRT2 ZFP91 FOS CREM SMARCC1 NFIL3 MEF2D SMARCA4 PIR59656 KIAA0753 PIR55314 PITPNM3
GH17J006454 Enhancer 0.9 Ensembl ENCODE dbSUPER 650.7 +1.3 1261 1.6 POLR2A IKZF1 ZFP36 ZBTB33 RUNX3 PIR59656 MIR324 PIR59695 PITPNM3
GH17J006471 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -15.8 -15770 1.4 NFIB JUN MAX ZIC2 RAD21 RFX5 FOSL1 ZFHX2 SMC3 RCOR1 AIPL1 WSCD1 PIR59656 PIR55314 PITPNM3 GC17M006460
GH17J006473 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -17.0 -17020 0.6 CTCF IRF2 USF1 ARID4B SIN3A ERF RAD21 ZNF614 GATAD1 SMC3 PIMREG PITPNM3 PIR59656 PIR55314 GC17M006460
GH17J006474 Enhancer 0.9 ENCODE dbSUPER 0.4 -19.7 -19708 3.2 SMAD1 NFIB JUN TAL1 RAD21 FOSL1 TCF12 CTBP1 GATA3 POLR2A PIMREG PITPNM3 ENSG00000262089 PIR55314 PIR59656 GC17M006460
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59656 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59656 Gene

Genomic Locations for PIR59656 Gene
chr17:6,456,253-6,456,281
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr17:6,359,573-6,359,601
(GRCh37/hg19)
Size:
29 bases
Orientation:
Minus strand

Genomic View for PIR59656 Gene

Genes around PIR59656 on UCSC Golden Path with GeneCards custom track

PIR59656 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59656 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59656 Gene

Function for PIR59656 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59656 Gene

Localization for PIR59656 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59656 Gene

Pathways & Interactions for PIR59656 Gene

SuperPathways for PIR59656 Gene

No Data Available

Interacting Proteins for PIR59656 Gene

Gene Ontology (GO) - Biological Process for PIR59656 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59656 Gene

Drugs & Compounds for PIR59656 Gene

No Compound Related Data Available

Transcripts for PIR59656 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59656 Gene

No ASD Table

Relevant External Links for PIR59656 Gene

GeneLoc Exon Structure for
PIR59656

No data available for mRNA/cDNA for PIR59656 Gene

Expression for PIR59656 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59656 Gene

Orthologs for PIR59656 Gene

No data available for Orthologs and Evolution for PIR59656 Gene

Paralogs for PIR59656 Gene

No data available for Paralogs for PIR59656 Gene

Variants for PIR59656 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59656 Gene

Disorders for PIR59656 Gene

No disorders were found for PIR59656 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59656 Gene

Publications for PIR59656 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59656 Gene

Sources for PIR59656 Gene

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