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Aliases for PIR59640 Gene

Subcategory (RNA class) for PIR59640 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59640 Gene

No Aliases found

ORGUL Members for PIR59640 Gene

No data available for External Ids for PIR59640 Gene

Summaries for PIR59640 Gene

GeneCards Summary for PIR59640 Gene

PIR59640 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59640 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59640 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59640 Gene

Genomics for PIR59640 Gene

GeneHancer (GH) Regulatory Elements for PIR59640 Gene

Promoters and enhancers for PIR59640 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J005370 Enhancer 0.5 dbSUPER 650.7 +0.2 197 1 BCOR ZNF121 POLR2A RBM22 ZMYM3 PIR59640 GC07P005366 PIR36601 TNRC18
GH07J005368 Enhancer 0.4 dbSUPER 650.7 +1.3 1345 1.1 ZNF121 ZMYM3 PRDM10 PIR59640 GC07P005366 PIR36601 TNRC18
GH07J005366 Enhancer 0.8 ENCODE 0.7 +4.6 4620 0.2 SIN3A RAD21 GLIS2 ARID2 ZNF143 BCLAF1 RUNX3 THAP11 ZNF362 ZNF654 GC07P005366 PIR59640 PIR36601 TNRC18
GH07J005367 Enhancer 0.3 dbSUPER 0.7 +3.0 3029 0.5 RXRA GC07P005366 PIR59640 PIR36601 TNRC18
GH07J005364 Enhancer 0.3 dbSUPER 0.4 +5.9 5857 0.9 MNT GC07P005366 PIR36601 PIR59640 TNRC18
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59640 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59640 Gene

Genomic Locations for PIR59640 Gene
chr7:5,370,829-5,370,855
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr7:5,410,460-5,410,486
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR59640 Gene

Genes around PIR59640 on UCSC Golden Path with GeneCards custom track

PIR59640 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59640 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59640 Gene

Function for PIR59640 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59640 Gene

Localization for PIR59640 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59640 Gene

Pathways & Interactions for PIR59640 Gene

SuperPathways for PIR59640 Gene

No Data Available

Interacting Proteins for PIR59640 Gene

Gene Ontology (GO) - Biological Process for PIR59640 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59640 Gene

Drugs & Compounds for PIR59640 Gene

No Compound Related Data Available

Transcripts for PIR59640 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59640 Gene

No ASD Table

Relevant External Links for PIR59640 Gene

GeneLoc Exon Structure for
PIR59640

No data available for mRNA/cDNA for PIR59640 Gene

Expression for PIR59640 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59640 Gene

Orthologs for PIR59640 Gene

No data available for Orthologs and Evolution for PIR59640 Gene

Paralogs for PIR59640 Gene

No data available for Paralogs for PIR59640 Gene

Variants for PIR59640 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59640 Gene

Disorders for PIR59640 Gene

No disorders were found for PIR59640 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59640 Gene

Publications for PIR59640 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59640 Gene

Sources for PIR59640 Gene

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