Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR59639 Gene

Subcategory (RNA class) for PIR59639 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59639 Gene

No Aliases found

ORGUL Members for PIR59639 Gene

Previous GeneCards Identifiers for PIR59639 Gene

  • GC09P130162

No data available for External Ids for PIR59639 Gene

Summaries for PIR59639 Gene

GeneCards Summary for PIR59639 Gene

PIR59639 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59639 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59639 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59639 Gene

Genomics for PIR59639 Gene

GeneHancer (GH) Regulatory Elements for PIR59639 Gene

Promoters and enhancers for PIR59639 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I127420 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.3 +23.2 23224 4.9 HDGF PKNOX1 ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF766 ZNF207 GC09M127421 ZNF79 RPL12 SLC2A8 ENSG00000272696 CDK9 NAIF1 SNORA65 PTRH1 PIR59639
GH09I127416 Enhancer 1 Ensembl ENCODE 0.4 +18.2 18183 2.8 PKNOX1 CLOCK NFIB NEUROD1 SIN3A RAD21 ZNF143 FOS RCOR1 EGR2 RPL12 SLC2A8 SNORA65 GARNL3 ENSG00000228487 CFAP157 TTC16 GC09M127421 PIR59639
GH09I127414 Enhancer 0.5 ENCODE 0.4 +15.4 15422 1.1 OSR2 ZNF316 PRDM6 MAFG MAFK EMSY SNORA65 ENSG00000228487 GARNL3 CFAP157 TTC16 GC09M127421 PIR59639
GH09I127410 Enhancer 0.4 ENCODE 0.4 +11.9 11945 2.6 PKNOX1 PRDM6 FOXA2 SLC2A8 RPL12 ENSG00000228487 GARNL3 ZNF79 GC09M127421 PIR59639
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59639 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59639 Gene

Genomic Locations for PIR59639 Gene
chr9:127,399,960-127,399,987
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr9:130,162,239-130,162,266
(GRCh37/hg19)

Genomic View for PIR59639 Gene

Genes around PIR59639 on UCSC Golden Path with GeneCards custom track

PIR59639 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59639 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59639 Gene

Proteins for PIR59639 Gene

Post-translational modifications for PIR59639 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59639 Gene

Domains & Families for PIR59639 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59639 Gene

Function for PIR59639 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59639 Gene

Localization for PIR59639 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59639 Gene

Pathways & Interactions for PIR59639 Gene

SuperPathways for PIR59639 Gene

No Data Available

Interacting Proteins for PIR59639 Gene

Gene Ontology (GO) - Biological Process for PIR59639 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59639 Gene

Drugs & Compounds for PIR59639 Gene

No Compound Related Data Available

Transcripts for PIR59639 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59639 Gene

No ASD Table

Relevant External Links for PIR59639 Gene

GeneLoc Exon Structure for
PIR59639

No data available for mRNA/cDNA for PIR59639 Gene

Expression for PIR59639 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59639 Gene

Orthologs for PIR59639 Gene

No data available for Orthologs and Evolution for PIR59639 Gene

Paralogs for PIR59639 Gene

No data available for Paralogs for PIR59639 Gene

Variants for PIR59639 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59639 Gene

Disorders for PIR59639 Gene

No disorders were found for PIR59639 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59639 Gene

Publications for PIR59639 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59639 Gene

Sources for PIR59639 Gene

Content
Loading form....