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Aliases for PIR59626 Gene

Subcategory (RNA class) for PIR59626 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59626 Gene

No Aliases found

ORGUL Members for PIR59626 Gene

No data available for External Ids for PIR59626 Gene

Summaries for PIR59626 Gene

GeneCards Summary for PIR59626 Gene

PIR59626 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59626 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59626 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59626 Gene

Genomics for PIR59626 Gene

GeneHancer (GH) Regulatory Elements for PIR59626 Gene

Promoters and enhancers for PIR59626 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I084663 Enhancer 0.5 ENCODE 550.8 +0.4 449 0.2 PKNOX1 NR2F1 EBF1 FEZF1 IKZF2 RUNX3 ZBTB17 GC16P084663 PIR59626 USP10 COTL1 KLHL36
GH16I084691 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +28.7 28730 1.6 PKNOX1 FOXA2 ARID4B DMAP1 ZBTB40 ZNF48 CREM THAP11 CEBPB ELF1 KLHL36 COTL1 KIAA0513 USP10 PIR59626
GH16I084672 Enhancer 0.8 ENCODE 0.4 +9.0 9019 0.2 CTCF ATF1 RB1 SAP130 ARID4B RAD21 CC2D1A ZFHX2 RFXANK ZBTB48 KLHL36 PIR59626 USP10
GH16I084673 Enhancer 0.7 Ensembl 0.4 +9.2 9220 0.2 CTCF ATF1 RB1 SAP130 RAD21 CC2D1A ZFHX2 RFXANK ZBTB48 ZNF143 PIR59626 USP10
GH16I084687 Enhancer 0.9 Ensembl ENCODE 0.3 +25.2 25213 2.7 BCOR PKNOX1 ESRRA JUN MAX CC2D1A TRIM24 FOS RUNX3 L3MBTL2 KLHL36 USP10 PIR59626
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59626 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59626 Gene

Genomic Locations for PIR59626 Gene
chr16:84,663,481-84,663,510
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr16:84,697,087-84,697,116
(GRCh37/hg19)

Genomic View for PIR59626 Gene

Genes around PIR59626 on UCSC Golden Path with GeneCards custom track

PIR59626 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59626 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59626 Gene

Proteins for PIR59626 Gene

Post-translational modifications for PIR59626 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59626 Gene

Domains & Families for PIR59626 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59626 Gene

Function for PIR59626 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59626 Gene

Localization for PIR59626 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59626 Gene

Pathways & Interactions for PIR59626 Gene

SuperPathways for PIR59626 Gene

No Data Available

Interacting Proteins for PIR59626 Gene

Gene Ontology (GO) - Biological Process for PIR59626 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59626 Gene

Drugs & Compounds for PIR59626 Gene

No Compound Related Data Available

Transcripts for PIR59626 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59626 Gene

No ASD Table

Relevant External Links for PIR59626 Gene

GeneLoc Exon Structure for
PIR59626

No data available for mRNA/cDNA for PIR59626 Gene

Expression for PIR59626 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59626 Gene

Orthologs for PIR59626 Gene

No data available for Orthologs and Evolution for PIR59626 Gene

Paralogs for PIR59626 Gene

No data available for Paralogs for PIR59626 Gene

Variants for PIR59626 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59626 Gene

Disorders for PIR59626 Gene

No disorders were found for PIR59626 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59626 Gene

Publications for PIR59626 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59626 Gene

Sources for PIR59626 Gene

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