Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR59593 Gene

Subcategory (RNA class) for PIR59593 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59593 Gene

No Aliases found

ORGUL Members for PIR59593 Gene

No data available for External Ids for PIR59593 Gene

Summaries for PIR59593 Gene

GeneCards Summary for PIR59593 Gene

PIR59593 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59593 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59593 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59593 Gene

Genomics for PIR59593 Gene

GeneHancer (GH) Regulatory Elements for PIR59593 Gene

Promoters and enhancers for PIR59593 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J001110 Enhancer 0.2 dbSUPER 650.7 -1.7 -1746 0.5 PIR59593 LOC101927021 C7orf50 MIR339 GPR146 ENSG00000225146 ZFAND2A GPER1 PIR46511
GH07J001102 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.6 4616 2.9 FOXA2 BATF IRF4 RAD21 EGR1 ZNF143 ATF7 ETV6 BCLAF1 IKZF2 LOC101927021 LOC105375120 GPER1 C7orf50 MIR339 GPR146 ZFAND2A ENSG00000225146 ADAP1 PIR59593
GH07J001100 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 +7.6 7607 2.2 ELF3 FOXA2 ZNF48 ZSCAN9 RAD21 RARA YY1 EGR1 THAP11 RXRA LOC101927021 ZFAND2A LOC105375120 GPER1 C7orf50 MIR339 GPR146 ENSG00000225146 ADAP1 TMEM184A
GH07J001095 Enhancer 0.9 ENCODE dbSUPER 0.4 +12.6 12576 0.9 NCOA3 NFIB MAX SIN3A BMI1 YY1 E2F1 GATA3 HNF4G NR2F6 LOC105375120 C7orf50 GPR146 ENSG00000225146 LOC101927021 PIR42335 PIR59593
GH07J001099 Enhancer 0.8 FANTOM5 dbSUPER 0.4 +9.0 8977 0.2 NCOA3 ZNF687 RFX1 KLF4 BMI1 RFX5 ZNF217 CTBP1 GATA3 CREB1 LOC101927021 GPER1 C7orf50 MIR339 GPR146 ENSG00000225146 ADAP1 TMEM184A SUN1 PIR59593
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59593 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59593 Gene

Genomic Locations for PIR59593 Gene
chr7:1,108,709-1,108,735
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr7:1,148,345-1,148,371
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR59593 Gene

Genes around PIR59593 on UCSC Golden Path with GeneCards custom track

PIR59593 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59593 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59593 Gene

Function for PIR59593 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59593 Gene

Localization for PIR59593 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59593 Gene

Pathways & Interactions for PIR59593 Gene

SuperPathways for PIR59593 Gene

No Data Available

Interacting Proteins for PIR59593 Gene

Gene Ontology (GO) - Biological Process for PIR59593 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59593 Gene

Drugs & Compounds for PIR59593 Gene

No Compound Related Data Available

Transcripts for PIR59593 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59593 Gene

No ASD Table

Relevant External Links for PIR59593 Gene

GeneLoc Exon Structure for
PIR59593

No data available for mRNA/cDNA for PIR59593 Gene

Expression for PIR59593 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59593 Gene

Orthologs for PIR59593 Gene

No data available for Orthologs and Evolution for PIR59593 Gene

Paralogs for PIR59593 Gene

No data available for Paralogs for PIR59593 Gene

Variants for PIR59593 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59593 Gene

Disorders for PIR59593 Gene

No disorders were found for PIR59593 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59593 Gene

Publications for PIR59593 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59593 Gene

Sources for PIR59593 Gene

Content
Loading form....