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Aliases for PIR59489 Gene

Subcategory (RNA class) for PIR59489 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR59489 Gene

No Aliases found

ORGUL Members for PIR59489 Gene

Previous GeneCards Identifiers for PIR59489 Gene

  • GC01M028913
  • GC01M028921
  • GC01M028930
  • GC01M028938
  • GC01M028587
  • GC01M028595
  • GC01M028601
  • GC01M028602
  • GC01M028608
  • GC01M028609
  • GC01M028614
  • GC01M028619

No data available for External Ids for PIR59489 Gene

Summaries for PIR59489 Gene

GeneCards Summary for PIR59489 Gene

PIR59489 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59489 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59489 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59489 Gene

Genomics for PIR59489 Gene

GeneHancer (GH) Regulatory Elements for PIR59489 Gene

Promoters and enhancers for PIR59489 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J028578 Promoter/Enhancer 1.6 Ensembl ENCODE 650.7 -1.3 -1307 4.5 ZFP64 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC SNHG12 GC01M028584 GC01M028618 GC01M028624 GC01M028628 GC01M028629 GC01M028630 GC01M028633 PIR59489 SNORA16A
GH01J028581 Enhancer 0.7 ENCODE 650.7 +1.9 1929 0.3 PAF1 SMAD5 ZNF10 ZBED1 BACH1 ZNF2 ZNF48 ZSCAN9 RFXANK POLR2A GC01M028584 GC01M028623 GC01M028629 GC01M028630 SNORD99 PIR59489 SNORA61 RPA2 GMEB1 TRNAU1AP
GH01J028580 Enhancer 0.6 ENCODE 650.7 +1.5 1549 0.2 PAF1 POLR2A SMAD5 BACH1 ZNF600 ELF1 ZNF2 SUPT5H GC01M028584 GC01M028623 GC01M028629 GC01M028630 SNORD99 PIR59489 SNORA61 PHACTR4 RPA2 GMEB1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59489 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59489 Gene

Genomic Locations for PIR59489 Gene
chr1:28,579,763-28,579,893
(GRCh38/hg38)
Size:
131 bases
Orientation:
Minus strand
chr1:28,906,275-28,906,405
(GRCh37/hg19)
Size:
131 bases
Orientation:
Minus strand

Genomic View for PIR59489 Gene

Genes around PIR59489 on UCSC Golden Path with GeneCards custom track

PIR59489 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59489 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59489 Gene

ORGUL Member Location for PIR59489 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59489 Gene

Function for PIR59489 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59489 Gene

Localization for PIR59489 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59489 Gene

Pathways & Interactions for PIR59489 Gene

SuperPathways for PIR59489 Gene

No Data Available

Interacting Proteins for PIR59489 Gene

Gene Ontology (GO) - Biological Process for PIR59489 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59489 Gene

Drugs & Compounds for PIR59489 Gene

No Compound Related Data Available

Transcripts for PIR59489 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59489 Gene

No ASD Table

Relevant External Links for PIR59489 Gene

GeneLoc Exon Structure for
PIR59489

No data available for mRNA/cDNA for PIR59489 Gene

Expression for PIR59489 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59489 Gene

Orthologs for PIR59489 Gene

No data available for Orthologs and Evolution for PIR59489 Gene

Paralogs for PIR59489 Gene

No data available for Paralogs for PIR59489 Gene

Variants for PIR59489 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59489 Gene

Disorders for PIR59489 Gene

No disorders were found for PIR59489 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59489 Gene

Publications for PIR59489 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59489 Gene

Sources for PIR59489 Gene

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