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Aliases for PIR59479 Gene

Subcategory (RNA class) for PIR59479 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59479 Gene

No Aliases found

ORGUL Members for PIR59479 Gene

Previous GeneCards Identifiers for PIR59479 Gene

  • GC12P029322

No data available for External Ids for PIR59479 Gene

Summaries for PIR59479 Gene

GeneCards Summary for PIR59479 Gene

PIR59479 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59479 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59479 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59479 Gene

Genomics for PIR59479 Gene

GeneHancer (GH) Regulatory Elements for PIR59479 Gene

Promoters and enhancers for PIR59479 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I029163 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.7 -1708 7.5 SMAD1 BMI1 BATF IRF4 ZNF766 ZNF366 ZNF207 ATF7 FOS BCLAF1 PIR59479 LOC100506606 ERGIC2 PIR55591 ENSG00000275278 FAR2
GH12I029159 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -9.1 -9116 1.3 ZNF639 PKNOX1 ATF2 ZNF395 GABPA MEF2D ZNF629 HMBOX1 ZNF600 LOC100506606 ENSG00000275278 PIR59479 FAR2
GH12I029156 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -11.3 -11339 3 ZNF335 JUND FOXA2 HLF MAX FOXA1 ENSG00000275278 LOC100506606 FAR2 PIR59479
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59479 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59479 Gene

Genomic Locations for PIR59479 Gene
chr12:29,169,250-29,169,278
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr12:29,322,183-29,322,211
(GRCh37/hg19)

Genomic View for PIR59479 Gene

Genes around PIR59479 on UCSC Golden Path with GeneCards custom track

PIR59479 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59479 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59479 Gene

Proteins for PIR59479 Gene

Post-translational modifications for PIR59479 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59479 Gene

Domains & Families for PIR59479 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59479 Gene

Function for PIR59479 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59479 Gene

Localization for PIR59479 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59479 Gene

Pathways & Interactions for PIR59479 Gene

SuperPathways for PIR59479 Gene

No Data Available

Interacting Proteins for PIR59479 Gene

Gene Ontology (GO) - Biological Process for PIR59479 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59479 Gene

Drugs & Compounds for PIR59479 Gene

No Compound Related Data Available

Transcripts for PIR59479 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59479 Gene

No ASD Table

Relevant External Links for PIR59479 Gene

GeneLoc Exon Structure for
PIR59479

No data available for mRNA/cDNA for PIR59479 Gene

Expression for PIR59479 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59479 Gene

Orthologs for PIR59479 Gene

No data available for Orthologs and Evolution for PIR59479 Gene

Paralogs for PIR59479 Gene

No data available for Paralogs for PIR59479 Gene

Variants for PIR59479 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59479 Gene

Disorders for PIR59479 Gene

No disorders were found for PIR59479 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59479 Gene

Publications for PIR59479 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59479 Gene

Sources for PIR59479 Gene

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