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Aliases for PIR59473 Gene

Subcategory (RNA class) for PIR59473 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59473 Gene

No Aliases found

ORGUL Members for PIR59473 Gene

No data available for External Ids for PIR59473 Gene

Summaries for PIR59473 Gene

GeneCards Summary for PIR59473 Gene

PIR59473 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59473 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59473 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59473 Gene

Genomics for PIR59473 Gene

GeneHancer (GH) Regulatory Elements for PIR59473 Gene

Promoters and enhancers for PIR59473 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J002504 Enhancer 0.7 Ensembl 0.7 +3.9 3857 0.4 MEIS2 TFAP4 FOXA2 SAP130 THRB TEAD3 FOSL2 FOS TEAD1 HLF PIR59473 GC06M002529 GC06M002417
GH06J002514 Enhancer 1 ENCODE 0.4 +15.1 15082 2 FOXA2 ARNT MLX ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 NFKBIZ GC06M002529 PIR59473 GC06M002417
GH06J002502 Enhancer 0.5 Ensembl 0.7 +2.4 2356 0.6 FOXA2 CEBPA CEBPG FOXA1 PIR59473 GC06M002529 GC06M002417
GH06J002521 Enhancer 0.6 Ensembl ENCODE 0.3 +22.6 22574 2 CTCF JUN ZNF507 LINC02521 LINC01600 TUBB2B GC06M002529 PIR59473 GC06M002417
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59473 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59473 Gene

Genomic Locations for PIR59473 Gene
chr6:2,500,344-2,500,372
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr6:2,500,578-2,500,606
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR59473 Gene

Genes around PIR59473 on UCSC Golden Path with GeneCards custom track

PIR59473 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59473 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59473 Gene

Function for PIR59473 Gene

Phenotypes From GWAS Catalog for PIR59473 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59473 Gene

Localization for PIR59473 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59473 Gene

Pathways & Interactions for PIR59473 Gene

SuperPathways for PIR59473 Gene

No Data Available

Interacting Proteins for PIR59473 Gene

Gene Ontology (GO) - Biological Process for PIR59473 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59473 Gene

Drugs & Compounds for PIR59473 Gene

No Compound Related Data Available

Transcripts for PIR59473 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59473 Gene

No ASD Table

Relevant External Links for PIR59473 Gene

GeneLoc Exon Structure for
PIR59473

No data available for mRNA/cDNA for PIR59473 Gene

Expression for PIR59473 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59473 Gene

Orthologs for PIR59473 Gene

No data available for Orthologs and Evolution for PIR59473 Gene

Paralogs for PIR59473 Gene

No data available for Paralogs for PIR59473 Gene

Variants for PIR59473 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59473 Gene

Disorders for PIR59473 Gene

No disorders were found for PIR59473 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59473 Gene

Publications for PIR59473 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59473 Gene

Sources for PIR59473 Gene

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