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Aliases for PIR59469 Gene

Subcategory (RNA class) for PIR59469 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59469 Gene

No Aliases found

ORGUL Members for PIR59469 Gene

Previous GeneCards Identifiers for PIR59469 Gene

  • GC12P002259

No data available for External Ids for PIR59469 Gene

Summaries for PIR59469 Gene

GeneCards Summary for PIR59469 Gene

PIR59469 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59469 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59469 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59469 Gene

Genomics for PIR59469 Gene

GeneHancer (GH) Regulatory Elements for PIR59469 Gene

Promoters and enhancers for PIR59469 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I002151 Enhancer 0.6 dbSUPER 550.8 +1.9 1949 2 NR2F1 JUNB EBF1 BATF IRF4 IKZF1 RUNX3 IKZF2 PIR59469 CACNA1C-AS4 PIR60554 CACNA1C
GH12I002149 Enhancer 0.2 dbSUPER 550.8 -0.5 -468 1.3 PIR59469 CACNA1C-AS4 GC12P002105 CACNA1C
GH12I002153 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.8 +3.9 3882 1.5 ZFHX2 FOS EGR2 CACNA1C-AS4 PIR59469 PIR60554 CACNA1C
GH12I002145 Enhancer 0.5 dbSUPER 0.8 -4.0 -3967 1.8 SCRT1 CBX8 FEZF1 FOXA1 CACNA1C-AS4 PIR59469 GC12P002105 CACNA1C
GH12I002107 Enhancer 0.6 dbSUPER 0.3 -37.9 -37918 9.3 ZFP64 MNT ZEB2 ZNF623 ZEB1 ZFHX2 ZNF184 POLR2A SCRT2 ZBTB17 CACNA1C GC12P002105 PIR59469
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59469 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59469 Gene

Genomic Locations for PIR59469 Gene
chr12:2,150,298-2,150,325
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr12:2,259,464-2,259,491
(GRCh37/hg19)

Genomic View for PIR59469 Gene

Genes around PIR59469 on UCSC Golden Path with GeneCards custom track

PIR59469 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59469 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59469 Gene

Proteins for PIR59469 Gene

Post-translational modifications for PIR59469 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59469 Gene

Domains & Families for PIR59469 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59469 Gene

Function for PIR59469 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59469 Gene

Localization for PIR59469 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59469 Gene

Pathways & Interactions for PIR59469 Gene

SuperPathways for PIR59469 Gene

No Data Available

Interacting Proteins for PIR59469 Gene

Gene Ontology (GO) - Biological Process for PIR59469 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59469 Gene

Drugs & Compounds for PIR59469 Gene

No Compound Related Data Available

Transcripts for PIR59469 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59469 Gene

No ASD Table

Relevant External Links for PIR59469 Gene

GeneLoc Exon Structure for
PIR59469

No data available for mRNA/cDNA for PIR59469 Gene

Expression for PIR59469 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59469 Gene

Orthologs for PIR59469 Gene

No data available for Orthologs and Evolution for PIR59469 Gene

Paralogs for PIR59469 Gene

No data available for Paralogs for PIR59469 Gene

Variants for PIR59469 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59469 Gene

Disorders for PIR59469 Gene

No disorders were found for PIR59469 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59469 Gene

Publications for PIR59469 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59469 Gene

Sources for PIR59469 Gene

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