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Aliases for PIR59468 Gene

Subcategory (RNA class) for PIR59468 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59468 Gene

No Aliases found

ORGUL Members for PIR59468 Gene

Previous GeneCards Identifiers for PIR59468 Gene

  • GC04M173908

No data available for External Ids for PIR59468 Gene

Summaries for PIR59468 Gene

GeneCards Summary for PIR59468 Gene

PIR59468 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59468 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59468 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59468 Gene

Genomics for PIR59468 Gene

GeneHancer (GH) Regulatory Elements for PIR59468 Gene

Promoters and enhancers for PIR59468 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I172981 Enhancer 1.1 Ensembl ENCODE 0.8 +5.0 4979 1.6 FOXA2 INSM2 MZF1 ZNF76 FEZF1 ZNF2 ZEB1 ZNF335 ZNF366 ZSCAN5C PIR59468 GC04P172770
GH04I172996 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.4 -10.3 -10325 3.4 PKNOX1 SMAD1 ARNT ZNF766 CBX5 FOS JUNB ZNF592 MEF2D SMARCA4 PIR59468 GC04M173056
GH04I172989 Enhancer 0.6 ENCODE 0.8 -2.6 -2563 1.4 RXRA TAL1 CBFA2T3 CHAMP1 CC2D1A HNF4A CBFA2T2 MIXL1 PIR59468 GC04M173056
GH04I172979 Enhancer 0.7 ENCODE 0.4 +8.5 8469 0.2 STAT1 FOXA2 SIX5 ELF1 REST EP300 FOXA1 YY1 SP1 JUND PIR59468 GC04P172770
GH04I172961 Enhancer 0.9 ENCODE 0.3 +25.0 24965 1.3 PKNOX1 FOXA2 INSM2 ZNF76 FEZF1 ZNF2 YY1 ZNF335 ZNF213 ZNF366 PIR59468 GC04P172770
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59468 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59468 Gene

Genomic Locations for PIR59468 Gene
chr4:172,987,525-172,987,554
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr4:173,908,676-173,908,705
(GRCh37/hg19)

Genomic View for PIR59468 Gene

Genes around PIR59468 on UCSC Golden Path with GeneCards custom track

PIR59468 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59468 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59468 Gene

Proteins for PIR59468 Gene

Post-translational modifications for PIR59468 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59468 Gene

Domains & Families for PIR59468 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59468 Gene

Function for PIR59468 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59468 Gene

Localization for PIR59468 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59468 Gene

Pathways & Interactions for PIR59468 Gene

SuperPathways for PIR59468 Gene

No Data Available

Interacting Proteins for PIR59468 Gene

Gene Ontology (GO) - Biological Process for PIR59468 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59468 Gene

Drugs & Compounds for PIR59468 Gene

No Compound Related Data Available

Transcripts for PIR59468 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59468 Gene

No ASD Table

Relevant External Links for PIR59468 Gene

GeneLoc Exon Structure for
PIR59468

No data available for mRNA/cDNA for PIR59468 Gene

Expression for PIR59468 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59468 Gene

Orthologs for PIR59468 Gene

No data available for Orthologs and Evolution for PIR59468 Gene

Paralogs for PIR59468 Gene

No data available for Paralogs for PIR59468 Gene

Variants for PIR59468 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59468 Gene

Disorders for PIR59468 Gene

No disorders were found for PIR59468 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59468 Gene

Publications for PIR59468 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59468 Gene

Sources for PIR59468 Gene

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