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Aliases for PIR59444 Gene

Subcategory (RNA class) for PIR59444 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59444 Gene

No Aliases found

ORGUL Members for PIR59444 Gene

Previous GeneCards Identifiers for PIR59444 Gene

  • GC17P038438

No data available for External Ids for PIR59444 Gene

Summaries for PIR59444 Gene

GeneCards Summary for PIR59444 Gene

PIR59444 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59444 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59444 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59444 Gene

Genomics for PIR59444 Gene

GeneHancer (GH) Regulatory Elements for PIR59444 Gene

Promoters and enhancers for PIR59444 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J078878 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.6 2617 9.2 PKNOX1 ARID4B SIN3A DMAP1 BRCA1 ZNF48 ETS1 ZNF766 GLIS2 ELK1 USP36 TIMP2 CYTH1 CANT1 ENGASE PIR59444 ENSG00000279339 CEP295NL
GH17J078875 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.9 -3857 2.4 SCRT1 KLF1 ZNF189 CEBPB ZFHX2 SCRT2 IKZF1 BCL6B PRDM10 ZNF600 TIMP2 USP36 PGS1 CANT1 CYTH1 PIR59444 GC17P078863 CEP295NL
GH17J078873 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -6.2 -6249 1.3 FEZF1 ZNF2 ZNF121 GLIS2 ZNF213 ATF7 SP3 TSHZ1 GLIS1 PRDM4 USP36 PIR59444 GC17P078863 CEP295NL TIMP2
GH17J078865 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -13.8 -13797 1.4 FOXA2 ARID4B ZNF48 YY1 SLC30A9 ZNF143 DEK RXRA MXD4 MIER2 GC17P078863 PIR59444 TIMP2
GH17J078888 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +10.7 10716 4.8 ZSCAN4 MAX PAX8 RELA ZFHX2 MTA3 POLR2A ARID2 RCOR1 RUNX3 ENSG00000279339 PIR59444 CEP295NL TIMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59444 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59444 Gene

Genomic Locations for PIR59444 Gene
chr17:78,880,098-78,880,126
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr17:38,438,090-38,438,118
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR59444 Gene

Genes around PIR59444 on UCSC Golden Path with GeneCards custom track

PIR59444 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59444 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59444 Gene

Function for PIR59444 Gene

Phenotypes From GWAS Catalog for PIR59444 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59444 Gene

Localization for PIR59444 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59444 Gene

Pathways & Interactions for PIR59444 Gene

SuperPathways for PIR59444 Gene

No Data Available

Interacting Proteins for PIR59444 Gene

Gene Ontology (GO) - Biological Process for PIR59444 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59444 Gene

Drugs & Compounds for PIR59444 Gene

No Compound Related Data Available

Transcripts for PIR59444 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59444 Gene

No ASD Table

Relevant External Links for PIR59444 Gene

GeneLoc Exon Structure for
PIR59444

No data available for mRNA/cDNA for PIR59444 Gene

Expression for PIR59444 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59444 Gene

Orthologs for PIR59444 Gene

No data available for Orthologs and Evolution for PIR59444 Gene

Paralogs for PIR59444 Gene

No data available for Paralogs for PIR59444 Gene

Variants for PIR59444 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59444 Gene

Disorders for PIR59444 Gene

No disorders were found for PIR59444 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59444 Gene

Publications for PIR59444 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59444 Gene

Sources for PIR59444 Gene

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