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Aliases for PIR59438 Gene

Subcategory (RNA class) for PIR59438 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59438 Gene

No Aliases found

ORGUL Members for PIR59438 Gene

Previous GeneCards Identifiers for PIR59438 Gene

  • GC0XP014321
  • GC09P029189

No data available for External Ids for PIR59438 Gene

Summaries for PIR59438 Gene

GeneCards Summary for PIR59438 Gene

PIR59438 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59438 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59438 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59438 Gene

Genomics for PIR59438 Gene

GeneHancer (GH) Regulatory Elements for PIR59438 Gene

Promoters and enhancers for PIR59438 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XI028624 Enhancer 0.4 dbSUPER 550.8 +0.6 573 1.5 SP1 POLR2A GC0XP028626 GC0XP028628 GC0XP028629 PIR55596 PIR59438 GC0XP028627 GC0XP028625 LOC100506811 IL1RAPL1
GH0XI028627 Enhancer 0.4 ENCODE 0.8 +3.5 3503 1.1 HNF4G HNF4A GC0XP028626 GC0XP028627 GC0XP028628 GC0XP028629 PIR59438 GC0XP028625 LOC100506811 IL1RAPL1
GH0XI028639 Enhancer 0.3 ENCODE 0.4 +14.6 14606 0.8 JUND GC0XP028625 GC0XP028626 PIR59438 GC0XP028629 GC0XP028628 GC0XP028627 LOC100506811 IL1RAPL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59438 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59438 Gene

Genomic Locations for PIR59438 Gene
chrX:28,624,911-28,624,942
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr9:29,189,941-29,189,973
(GRCh37/hg19)

Genomic View for PIR59438 Gene

Genes around PIR59438 on UCSC Golden Path with GeneCards custom track

PIR59438 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59438 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59438 Gene

Proteins for PIR59438 Gene

Post-translational modifications for PIR59438 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59438 Gene

Domains & Families for PIR59438 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59438 Gene

Function for PIR59438 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59438 Gene

Localization for PIR59438 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59438 Gene

Pathways & Interactions for PIR59438 Gene

SuperPathways for PIR59438 Gene

No Data Available

Interacting Proteins for PIR59438 Gene

Gene Ontology (GO) - Biological Process for PIR59438 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59438 Gene

Drugs & Compounds for PIR59438 Gene

No Compound Related Data Available

Transcripts for PIR59438 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59438 Gene

No ASD Table

Relevant External Links for PIR59438 Gene

GeneLoc Exon Structure for
PIR59438

No data available for mRNA/cDNA for PIR59438 Gene

Expression for PIR59438 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59438 Gene

Orthologs for PIR59438 Gene

No data available for Orthologs and Evolution for PIR59438 Gene

Paralogs for PIR59438 Gene

No data available for Paralogs for PIR59438 Gene

Variants for PIR59438 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59438 Gene

Disorders for PIR59438 Gene

No disorders were found for PIR59438 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59438 Gene

Publications for PIR59438 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59438 Gene

Sources for PIR59438 Gene

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