Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR59421 Gene

Subcategory (RNA class) for PIR59421 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59421 Gene

No Aliases found

No data available for External Ids for PIR59421 Gene

Summaries for PIR59421 Gene

GeneCards Summary for PIR59421 Gene

PIR59421 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59421 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59421

Additional gene information for PIR59421 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59421 Gene

Genomics for PIR59421 Gene

GeneHancer (GH) Regulatory Elements for PIR59421 Gene

Promoters and enhancers for PIR59421 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J152693 Enhancer 0.2 dbSUPER 650.7 +1.3 1270 1.4 PIR59421 ENSG00000248571 TMEM154 GC04M152697
GH04J152695 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.0 3983 3.1 BMI1 BATF KLF5 IRF4 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 CREM TMEM154 GC04M152697 PIR59421
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59421 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59421 Gene

Genomic Locations for PIR59421 Gene
chr4:152,693,224-152,693,266
(GRCh38/hg38)
Size:
43 bases
Orientation:
Plus strand

Genomic View for PIR59421 Gene

Genes around PIR59421 on UCSC Golden Path with GeneCards custom track

PIR59421 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59421 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59421 Gene

ORGUL Member Location for PIR59421 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59421 Gene

Function for PIR59421 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59421 Gene

Localization for PIR59421 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59421 Gene

Pathways & Interactions for PIR59421 Gene

SuperPathways for PIR59421 Gene

No Data Available

Interacting Proteins for PIR59421 Gene

Gene Ontology (GO) - Biological Process for PIR59421 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59421 Gene

Drugs & Compounds for PIR59421 Gene

No Compound Related Data Available

Transcripts for PIR59421 Gene

fRNAdb Secondary structures for PIR59421 Gene

  • FR011232
  • FR205270
  • FR058256
  • FR307779

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59421 Gene

No ASD Table

Relevant External Links for PIR59421 Gene

GeneLoc Exon Structure for
PIR59421

No data available for mRNA/cDNA for PIR59421 Gene

Expression for PIR59421 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59421 Gene

Orthologs for PIR59421 Gene

No data available for Orthologs and Evolution for PIR59421 Gene

Paralogs for PIR59421 Gene

No data available for Paralogs for PIR59421 Gene

Variants for PIR59421 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59421 Gene

Disorders for PIR59421 Gene

No disorders were found for PIR59421 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59421 Gene

Publications for PIR59421 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59421 Gene

Sources for PIR59421 Gene

Content
Loading form....