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Aliases for PIR59417 Gene

Subcategory (RNA class) for PIR59417 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR59417 Gene

No Aliases found

ORGUL Members for PIR59417 Gene

No data available for External Ids for PIR59417 Gene

Summaries for PIR59417 Gene

GeneCards Summary for PIR59417 Gene

PIR59417 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59417 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59417

Additional gene information for PIR59417 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59417 Gene

Genomics for PIR59417 Gene

GeneHancer (GH) Regulatory Elements for PIR59417 Gene

Promoters and enhancers for PIR59417 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J001099 Enhancer 0.4 dbSUPER 650.7 -1.5 -1543 2.3 KLF1 EGR1 KLF14 GC11M001099 PIR59417 SIGIRR GC11P001121 MUC2
GH11J001102 Promoter 0.5 EPDnew 0.7 -3.0 -2976 0.1 MUC2 GC11M001099 PIR59417 GC11P001121
GH11J001114 Enhancer 0.6 ENCODE 0.4 -15.5 -15457 0.2 SCRT1 CTCF ZNF654 MAX REST ZNF2 RAD21 SP1 CC2D1A XRCC5 GC11P001121 PIR59417 GC11M001099
GH11J001089 Promoter 0.5 EPDnew 0.4 +9.8 9827 0.1 TNNT3 GC11M001099 PIR59417 MUC2
GH11J001083 Enhancer 0.4 dbSUPER 0.4 +15.6 15605 0.5 NFIB ZIC2 MUC2 PIR59417 GC11M001099
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59417 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59417 Gene

Genomic Locations for PIR59417 Gene
chr11:1,099,409-1,099,441
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand
chr11:1,093,317-1,093,349
(GRCh37/hg19)
Size:
33 bases
Orientation:
Minus strand

Genomic View for PIR59417 Gene

Genes around PIR59417 on UCSC Golden Path with GeneCards custom track

PIR59417 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59417 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59417 Gene

ORGUL Member Location for PIR59417 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59417 Gene

Function for PIR59417 Gene

Phenotypes From GWAS Catalog for PIR59417 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59417 Gene

Localization for PIR59417 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59417 Gene

Pathways & Interactions for PIR59417 Gene

SuperPathways for PIR59417 Gene

No Data Available

Interacting Proteins for PIR59417 Gene

Gene Ontology (GO) - Biological Process for PIR59417 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59417 Gene

Drugs & Compounds for PIR59417 Gene

No Compound Related Data Available

Transcripts for PIR59417 Gene

fRNAdb Secondary structures for PIR59417 Gene

  • FR345188

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59417 Gene

No ASD Table

Relevant External Links for PIR59417 Gene

GeneLoc Exon Structure for
PIR59417

No data available for mRNA/cDNA for PIR59417 Gene

Expression for PIR59417 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59417 Gene

Orthologs for PIR59417 Gene

No data available for Orthologs and Evolution for PIR59417 Gene

Paralogs for PIR59417 Gene

No data available for Paralogs for PIR59417 Gene

Variants for PIR59417 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59417 Gene

Disorders for PIR59417 Gene

No disorders were found for PIR59417 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59417 Gene

Publications for PIR59417 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59417 Gene

Sources for PIR59417 Gene

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