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Aliases for PIR59410 Gene

Subcategory (RNA class) for PIR59410 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR59410 Gene

No Aliases found

ORGUL Members for PIR59410 Gene

Previous GeneCards Identifiers for PIR59410 Gene

  • GC15M030241

No data available for External Ids for PIR59410 Gene

Summaries for PIR59410 Gene

GeneCards Summary for PIR59410 Gene

PIR59410 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59410 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59410 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59410 Gene

Genomics for PIR59410 Gene

GeneHancer (GH) Regulatory Elements for PIR59410 Gene

Promoters and enhancers for PIR59410 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I029947 Enhancer 0.2 dbSUPER 550.8 +2.0 1982 0.7 GC15M029950 PIR59410 ENSG00000229389 TJP1 ENSG00000259523
GH15I029949 Enhancer 0.7 dbSUPER 0.8 -2.4 -2428 4.7 PKNOX1 ZSCAN26 INSM2 MZF1 YBX1 FEZF1 ZIC2 ZNF2 BCL11B ZNF664 ENSG00000229389 ENSG00000270015 ENSG00000259523 GC15M029950 PIR59410 TJP1
GH15I029945 Enhancer 0.6 ENCODE dbSUPER 0.8 +3.5 3540 1.6 POLR2A NFE2 PRDM1 ENSG00000229389 ENSG00000270015 CHRFAM7A TJP1 GC15M029950 PIR59410 ENSG00000259523
GH15I029924 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +24.2 24234 2.8 FOXA2 RB1 KLF17 SIN3A MZF1 ZNF76 ZNF2 RAD21 GLIS2 ZNF366 TJP1 GC15M029950 PIR59410 ENSG00000259523
GH15I029968 Promoter/Enhancer 1.1 Ensembl dbSUPER 0.4 -19.1 -19147 0.8 L3MBTL2 ZBTB8A ZNF335 CBX8 ZFX ZBTB26 CHD2 EZH2 ZBTB20 TJP1 PIR59410 GC15M029950
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59410 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59410 Gene

Genomic Locations for PIR59410 Gene
chr15:29,949,624-29,949,654
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr15:30,241,827-30,241,857
(GRCh37/hg19)

Genomic View for PIR59410 Gene

Genes around PIR59410 on UCSC Golden Path with GeneCards custom track

PIR59410 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59410 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59410 Gene

ORGUL Member Location for PIR59410 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59410 Gene

Proteins for PIR59410 Gene

Post-translational modifications for PIR59410 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59410 Gene

Domains & Families for PIR59410 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59410 Gene

Function for PIR59410 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59410 Gene

Localization for PIR59410 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59410 Gene

Pathways & Interactions for PIR59410 Gene

SuperPathways for PIR59410 Gene

No Data Available

Interacting Proteins for PIR59410 Gene

Gene Ontology (GO) - Biological Process for PIR59410 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59410 Gene

Drugs & Compounds for PIR59410 Gene

No Compound Related Data Available

Transcripts for PIR59410 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59410 Gene

No ASD Table

Relevant External Links for PIR59410 Gene

GeneLoc Exon Structure for
PIR59410

No data available for mRNA/cDNA for PIR59410 Gene

Expression for PIR59410 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59410 Gene

Orthologs for PIR59410 Gene

No data available for Orthologs and Evolution for PIR59410 Gene

Paralogs for PIR59410 Gene

No data available for Paralogs for PIR59410 Gene

Variants for PIR59410 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59410 Gene

Disorders for PIR59410 Gene

No disorders were found for PIR59410 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59410 Gene

Publications for PIR59410 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59410 Gene

Sources for PIR59410 Gene

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