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Aliases for PIR59389 Gene

Subcategory (RNA class) for PIR59389 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59389 Gene

No Aliases found

ORGUL Members for PIR59389 Gene

Previous GeneCards Identifiers for PIR59389 Gene

  • GC13M052743
  • GC13M052173
  • GC13M052174
  • GC13M052177
  • GC13M052179
  • GC13M052181
  • GC13M052183
  • GC13M052185

No data available for External Ids for PIR59389 Gene

Summaries for PIR59389 Gene

GeneCards Summary for PIR59389 Gene

PIR59389 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59389 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59389 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59389 Gene

Genomics for PIR59389 Gene

GeneHancer (GH) Regulatory Elements for PIR59389 Gene

Promoters and enhancers for PIR59389 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH13I052166 Enhancer 0.2 dbSUPER 550.8 +1.5 1514 2 THSD1P1 PIR59389 NEK5 TPTE2P2 DHRS12 ENSG00000231856 ENSG00000244471 NEK3 MRPS31P5 ENSG00000217576
GH13I052170 Enhancer 0.5 ENCODE dbSUPER 0.8 -2.1 -2085 1.1 ATF3 CKAP2 NEK5 UTP14C ALG11 PIR59389 MRPS31P5 ENSG00000217576
GH13I052186 Enhancer 1 ENCODE dbSUPER 0.4 -18.9 -18919 2.3 HDAC1 PKNOX1 ARID4B BMI1 TCF12 ZNF766 ATF7 CREM USF2 REST NEK3 NEK5 CCDC70 ALG11 VPS36 ATP7B DHRS12 ENSG00000231856 ENSG00000244471 MRPS31P5
GH13I052174 Enhancer 0.5 Ensembl dbSUPER 0.4 -5.1 -5066 0.4 POLR2A NEK5 UTP14C ALG11 PIR59389 MRPS31P5 ENSG00000217576
GH13I052181 Enhancer 0.2 dbSUPER 0.4 -12.6 -12580 1.2 ALG11 ATP7B ENSG00000231856 DHRS12 MRPS31P5 PIR59389 ENSG00000217576
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59389 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59389 Gene

Genomic Locations for PIR59389 Gene
chr13:52,169,090-52,169,118
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr13:52,743,225-52,743,253
(GRCh37/hg19)

Genomic View for PIR59389 Gene

Genes around PIR59389 on UCSC Golden Path with GeneCards custom track

PIR59389 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59389 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59389 Gene

Proteins for PIR59389 Gene

Post-translational modifications for PIR59389 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59389 Gene

Domains & Families for PIR59389 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59389 Gene

Function for PIR59389 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59389 Gene

Localization for PIR59389 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59389 Gene

Pathways & Interactions for PIR59389 Gene

SuperPathways for PIR59389 Gene

No Data Available

Interacting Proteins for PIR59389 Gene

Gene Ontology (GO) - Biological Process for PIR59389 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59389 Gene

Drugs & Compounds for PIR59389 Gene

No Compound Related Data Available

Transcripts for PIR59389 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59389 Gene

No ASD Table

Relevant External Links for PIR59389 Gene

GeneLoc Exon Structure for
PIR59389

No data available for mRNA/cDNA for PIR59389 Gene

Expression for PIR59389 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59389 Gene

Orthologs for PIR59389 Gene

No data available for Orthologs and Evolution for PIR59389 Gene

Paralogs for PIR59389 Gene

No data available for Paralogs for PIR59389 Gene

Variants for PIR59389 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59389 Gene

Disorders for PIR59389 Gene

No disorders were found for PIR59389 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59389 Gene

Publications for PIR59389 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59389 Gene

Sources for PIR59389 Gene

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