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Aliases for PIR59377 Gene

Subcategory (RNA class) for PIR59377 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59377 Gene

No Aliases found

ORGUL Members for PIR59377 Gene

Previous GeneCards Identifiers for PIR59377 Gene

  • GC03M013564
  • GC03M013570
  • GC03M013676
  • GC03M013763
  • GC03M013886
  • GC03M014000
  • GC03M014121
  • GC03M014247

No data available for External Ids for PIR59377 Gene

Summaries for PIR59377 Gene

GeneCards Summary for PIR59377 Gene

PIR59377 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59377 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59377 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59377 Gene

Genomics for PIR59377 Gene

GeneHancer (GH) Regulatory Elements for PIR59377 Gene

Promoters and enhancers for PIR59377 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I013532 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -13.2 -13172 7.7 PKNOX1 NEUROD1 ZBTB7B BRCA1 FOS ZNF592 CTCF NCOA3 ZNF146 KLF1 LINC00620 FBLN2 HDAC11 PIR59377
GH03I013483 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +38.6 38568 3.2 HDGF FOXA2 PKNOX1 SMAD1 MLX ARNT ZFP64 ARID4B DMAP1 ZNF2 NUP210 HDAC11-AS1 HDAC11 PIR59377
GH03I013525 Enhancer 0.5 ENCODE dbSUPER 0.8 -2.0 -2010 0.1 PRDM10 PIR59377 FBLN2
GH03I013506 Enhancer 1 ENCODE dbSUPER 0.4 +15.6 15563 1.9 CLOCK NEUROD1 KLF17 GLIS2 SMARCC2 SMARCA5 USF2 ZNF398 SREBF1 ZNF217 HDAC11 HDAC11-AS1 PIR59377
GH03I013526 Enhancer 0.5 Ensembl dbSUPER 0.8 -2.7 -2655 0.2 ZIC2 PIR59377 FBLN2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59377 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59377 Gene

Genomic Locations for PIR59377 Gene
chr3:13,523,418-13,523,446
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr3:13,564,918-13,564,946
(GRCh37/hg19)

Genomic View for PIR59377 Gene

Genes around PIR59377 on UCSC Golden Path with GeneCards custom track

PIR59377 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59377 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59377 Gene

Proteins for PIR59377 Gene

Post-translational modifications for PIR59377 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59377 Gene

Domains & Families for PIR59377 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59377 Gene

Function for PIR59377 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59377 Gene

Localization for PIR59377 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59377 Gene

Pathways & Interactions for PIR59377 Gene

SuperPathways for PIR59377 Gene

No Data Available

Interacting Proteins for PIR59377 Gene

Gene Ontology (GO) - Biological Process for PIR59377 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59377 Gene

Drugs & Compounds for PIR59377 Gene

No Compound Related Data Available

Transcripts for PIR59377 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59377 Gene

No ASD Table

Relevant External Links for PIR59377 Gene

GeneLoc Exon Structure for
PIR59377

No data available for mRNA/cDNA for PIR59377 Gene

Expression for PIR59377 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59377 Gene

Orthologs for PIR59377 Gene

No data available for Orthologs and Evolution for PIR59377 Gene

Paralogs for PIR59377 Gene

No data available for Paralogs for PIR59377 Gene

Variants for PIR59377 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59377 Gene

Disorders for PIR59377 Gene

No disorders were found for PIR59377 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59377 Gene

Publications for PIR59377 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59377 Gene

Sources for PIR59377 Gene

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