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Aliases for PIR59298 Gene

Subcategory (RNA class) for PIR59298 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59298 Gene

No Aliases found

Previous GeneCards Identifiers for PIR59298 Gene

  • GC06M028807
  • GC06P028576
  • GC06M028834
  • GC06M028837
  • GC06P028609
  • GC06P028610
  • GC06P028615
  • GC06P028616
  • GC06P028617
  • GC06P028620
  • GC06P028621
  • GC06P028622

No data available for External Ids for PIR59298 Gene

Summaries for PIR59298 Gene

GeneCards Summary for PIR59298 Gene

PIR59298 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59298 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59298

Additional gene information for PIR59298 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59298 Gene

Genomics for PIR59298 Gene

GeneHancer (GH) Regulatory Elements for PIR59298 Gene

Promoters and enhancers for PIR59298 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J028606 Enhancer 1.2 Ensembl ENCODE 650.7 -0.2 -238 1.2 PKNOX1 ARID4B SIN3A ZNF2 ZNF213 E2F8 ZNF143 ZNF548 FOS KLF13 GC06P028608 TRA-AGC3-1 PIR59298 ZKSCAN8 ZSCAN12 ZKSCAN3 ZKSCAN4 ZSCAN9 ZSCAN23 ZNF165
GH06J028607 Enhancer 0.7 ENCODE 650.7 +0.9 873 0.7 HDAC1 ATF1 CHAMP1 FOSL1 CC2D1A NCOR1 FOXK2 ATF7 CREM SMARCE1 GC06P028608 TRA-AGC3-1 PIR59298 ZNF603P GPX6 ZBED9 GC06M028606 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59298 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59298 Gene

Genomic Locations for PIR59298 Gene
chr6:28,607,155-28,607,187
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand
chr6:28,831,501-28,831,534
(GRCh37/hg19)
Size:
34 bases
Orientation:
Minus strand

Genomic View for PIR59298 Gene

Genes around PIR59298 on UCSC Golden Path with GeneCards custom track

PIR59298 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59298 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59298 Gene

ORGUL Member Location for PIR59298 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59298 Gene

Function for PIR59298 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59298 Gene

Localization for PIR59298 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59298 Gene

Pathways & Interactions for PIR59298 Gene

SuperPathways for PIR59298 Gene

No Data Available

Interacting Proteins for PIR59298 Gene

Gene Ontology (GO) - Biological Process for PIR59298 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59298 Gene

Drugs & Compounds for PIR59298 Gene

No Compound Related Data Available

Transcripts for PIR59298 Gene

fRNAdb Secondary structures for PIR59298 Gene

  • FR375009
  • FR214686
  • FR151677
  • FR291543

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59298 Gene

No ASD Table

Relevant External Links for PIR59298 Gene

GeneLoc Exon Structure for
PIR59298

No data available for mRNA/cDNA for PIR59298 Gene

Expression for PIR59298 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59298 Gene

Orthologs for PIR59298 Gene

No data available for Orthologs and Evolution for PIR59298 Gene

Paralogs for PIR59298 Gene

No data available for Paralogs for PIR59298 Gene

Variants for PIR59298 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59298 Gene

Disorders for PIR59298 Gene

No disorders were found for PIR59298 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59298 Gene

Publications for PIR59298 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59298 Gene

Sources for PIR59298 Gene

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