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Aliases for PIR59284 Gene

Subcategory (RNA class) for PIR59284 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59284 Gene

No Aliases found

ORGUL Members for PIR59284 Gene

Previous GeneCards Identifiers for PIR59284 Gene

  • GC16M089764

No data available for External Ids for PIR59284 Gene

Summaries for PIR59284 Gene

GeneCards Summary for PIR59284 Gene

PIR59284 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59284 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59284 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59284 Gene

Genomics for PIR59284 Gene

GeneHancer (GH) Regulatory Elements for PIR59284 Gene

Promoters and enhancers for PIR59284 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16I089696 Enhancer 0.6 ENCODE 550.8 +1.4 1383 0.8 SCRT1 KLF1 NR2F1 SMARCB1 HIC1 POLR2A GLIS1 SCRT2 RUNX3 SUPT5H PIR59284 CDK10 LINC02166 SPATA2L
GH16I089699 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.8 -2.9 -2903 2.9 HDGF PKNOX1 CLOCK MLX ARNT ARID4B NEUROD1 SIN3A FEZF1 DMAP1 SPATA2L CDK10 CHMP1A ACSF3 ANKRD11 ZNF778 GALNS TCF25 SNORD68 ENSG00000268218
GH16I089686 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 +11.0 10984 2.5 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B ZNF207 CDK10 LINC02166 DPEP1 VPS9D1 ZNF276 FANCA PIR59284
GH16I089694 Enhancer 0.7 ENCODE 0.8 +2.8 2780 1.1 TFAP4 KLF1 SAP130 ZFP64 DMAP1 POLR2A NR2F6 ZNF600 KLF8 ZNF3 CDK10 PIR59284 LINC02166
GH16I089688 Enhancer 0.6 ENCODE 0.4 +9.6 9627 0.2 SOX5 ZNF792 TEAD1 HLF THRB TEAD3 NFIL3 CEBPA KDM1A CHMP1A LINC02166 PIR59284 CDK10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59284 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59284 Gene

Genomic Locations for PIR59284 Gene
chr16:89,698,269-89,698,295
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr16:89,764,677-89,764,703
(GRCh37/hg19)

Genomic View for PIR59284 Gene

Genes around PIR59284 on UCSC Golden Path with GeneCards custom track

PIR59284 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59284 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59284 Gene

Proteins for PIR59284 Gene

Post-translational modifications for PIR59284 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59284 Gene

Domains & Families for PIR59284 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59284 Gene

Function for PIR59284 Gene

Phenotypes From GWAS Catalog for PIR59284 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59284 Gene

Localization for PIR59284 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59284 Gene

Pathways & Interactions for PIR59284 Gene

SuperPathways for PIR59284 Gene

No Data Available

Interacting Proteins for PIR59284 Gene

Gene Ontology (GO) - Biological Process for PIR59284 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59284 Gene

Drugs & Compounds for PIR59284 Gene

No Compound Related Data Available

Transcripts for PIR59284 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59284 Gene

No ASD Table

Relevant External Links for PIR59284 Gene

GeneLoc Exon Structure for
PIR59284

No data available for mRNA/cDNA for PIR59284 Gene

Expression for PIR59284 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59284 Gene

Orthologs for PIR59284 Gene

No data available for Orthologs and Evolution for PIR59284 Gene

Paralogs for PIR59284 Gene

No data available for Paralogs for PIR59284 Gene

Variants for PIR59284 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59284 Gene

Disorders for PIR59284 Gene

No disorders were found for PIR59284 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59284 Gene

Publications for PIR59284 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59284 Gene

Sources for PIR59284 Gene

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