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Aliases for PIR59281 Gene

Subcategory (RNA class) for PIR59281 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59281 Gene

No Aliases found

ORGUL Members for PIR59281 Gene

Previous GeneCards Identifiers for PIR59281 Gene

  • GC01P016011
  • GC01P015685
  • GC01P015687

No data available for External Ids for PIR59281 Gene

Summaries for PIR59281 Gene

GeneCards Summary for PIR59281 Gene

PIR59281 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59281 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59281 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59281 Gene

Genomics for PIR59281 Gene

GeneHancer (GH) Regulatory Elements for PIR59281 Gene

Promoters and enhancers for PIR59281 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J015678 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -2.1 -2128 8 ZFX ELF3 NKRF POLR2A ZNF384 ZBTB7A YY1 PRDM1 MLLT1 ZNF639 PLEKHM2 ENSG00000271742 SPEN CROCCP3 CASP9 SLC25A34 LINC01772 CROCCP2 ZBTB17 RPL22P3
GH01J015690 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +7.4 7392 2.2 TRIM24 PRDM1 SMARCA4 RXRA IKZF1 ZNF512 SP1 NR2C1 ZNF316 GABPA SLC25A34 PLEKHM2 PIR59281 PIR54516
GH01J015702 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 0.4 +19.4 19409 2.5 ZNF121 SP1 PRDM10 ZNF341 ZNF316 CTCF RFX1 EGR1 FOXA2 FOS SLC25A34 PLEKHM2 TMEM82 FAM131C PIR54516 PIR59281
GH01J015696 Enhancer 1 ENCODE dbSUPER 0.4 +13.1 13053 1.9 SP1 NKRF ZNF121 ZNF687 RELA CREM PRDM1 MLLT1 IKZF1 POLR2A SLC25A34 ENSG00000237938 RSC1A1 FBLIM1 RNU7-179P HSPB7 SCARNA21B SZRD1 PLEKHM2 FAM131C
GH01J015706 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +22.9 22893 1.2 ZEB2 SCRT2 SCRT1 ZBTB40 PLEKHM2 PIR54516 PIR59281
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR59281 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59281 Gene

Genomic Locations for PIR59281 Gene
chr1:15,684,508-15,684,534
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr1:16,011,003-16,011,029
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR59281 Gene

Genes around PIR59281 on UCSC Golden Path with GeneCards custom track

PIR59281 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59281 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59281 Gene

Proteins for PIR59281 Gene

Post-translational modifications for PIR59281 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59281 Gene

Domains & Families for PIR59281 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59281 Gene

Function for PIR59281 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59281 Gene

Localization for PIR59281 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59281 Gene

Pathways & Interactions for PIR59281 Gene

PathCards logo

SuperPathways for PIR59281 Gene

No Data Available

Interacting Proteins for PIR59281 Gene

Gene Ontology (GO) - Biological Process for PIR59281 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59281 Gene

Drugs & Compounds for PIR59281 Gene

No Compound Related Data Available

Transcripts for PIR59281 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59281 Gene

No ASD Table

Relevant External Links for PIR59281 Gene

GeneLoc Exon Structure for
PIR59281

No data available for mRNA/cDNA for PIR59281 Gene

Expression for PIR59281 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59281 Gene

Orthologs for PIR59281 Gene

No data available for Orthologs and Evolution for PIR59281 Gene

Paralogs for PIR59281 Gene

No data available for Paralogs for PIR59281 Gene

Variants for PIR59281 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59281 Gene

Disorders for PIR59281 Gene

No disorders were found for PIR59281 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59281 Gene

Publications for PIR59281 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR59281 Gene

Products for PIR59281 Gene

Sources for PIR59281 Gene

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