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Aliases for PIR59230 Gene

Subcategory (RNA class) for PIR59230 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59230 Gene

No Aliases found

ORGUL Members for PIR59230 Gene

Previous GeneCards Identifiers for PIR59230 Gene

  • GC18M077380

No data available for External Ids for PIR59230 Gene

Summaries for PIR59230 Gene

GeneCards Summary for PIR59230 Gene

PIR59230 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59230 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59230 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59230 Gene

Genomics for PIR59230 Gene

GeneHancer (GH) Regulatory Elements for PIR59230 Gene

Promoters and enhancers for PIR59230 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18J079624 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.7 -4.2 -4246 1.7 MEIS2 PKNOX1 ATF1 MAX KLF5 RELA FOXK2 POLR2A EED PRDM10 CTDP1 ENSG00000267287 PQLC1 TXNL4A NFATC1 ADNP2 PIR59230 ENSG00000274828
GH18J079642 Enhancer 1 Ensembl ENCODE 0.3 -22.7 -22718 1.7 RB1 KLF14 IRF4 ZNF48 RAD21 GLIS2 ARID2 ZNF207 ZNF143 BCLAF1 NFATC1 CTDP1 PIR59230 ENSG00000178412 ENSG00000274828 LOC284241
GH18J079616 Enhancer 0.3 Ensembl 0.7 +3.5 3471 1.7 VEZF1 PIR59230 PIR52484
GH18J079664 Enhancer 0.5 ENCODE 0.3 -43.9 -43893 0.4 GATA3 DPF2 FOS FOXA1 ENSG00000274828 ENSG00000178412 LOC284241 PIR59230
GH18J079657 Enhancer 0.4 ENCODE 0.3 -36.6 -36579 0.2 CTCF SIN3A CTDP1 HSBP1L1 LOC284241 ENSG00000178412 ENSG00000274828 PIR59230
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59230 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59230 Gene

Genomic Locations for PIR59230 Gene
chr18:79,620,890-79,620,917
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr18:77,380,890-77,380,917
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR59230 Gene

Genes around PIR59230 on UCSC Golden Path with GeneCards custom track

PIR59230 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59230 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59230 Gene

Function for PIR59230 Gene

Phenotypes From GWAS Catalog for PIR59230 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59230 Gene

Localization for PIR59230 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59230 Gene

Pathways & Interactions for PIR59230 Gene

SuperPathways for PIR59230 Gene

No Data Available

Interacting Proteins for PIR59230 Gene

Gene Ontology (GO) - Biological Process for PIR59230 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59230 Gene

Drugs & Compounds for PIR59230 Gene

No Compound Related Data Available

Transcripts for PIR59230 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59230 Gene

No ASD Table

Relevant External Links for PIR59230 Gene

GeneLoc Exon Structure for
PIR59230

No data available for mRNA/cDNA for PIR59230 Gene

Expression for PIR59230 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59230 Gene

Orthologs for PIR59230 Gene

No data available for Orthologs and Evolution for PIR59230 Gene

Paralogs for PIR59230 Gene

No data available for Paralogs for PIR59230 Gene

Variants for PIR59230 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59230 Gene

Disorders for PIR59230 Gene

No disorders were found for PIR59230 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59230 Gene

Publications for PIR59230 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59230 Gene

Sources for PIR59230 Gene

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