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Aliases for PIR59218 Gene

Subcategory (RNA class) for PIR59218 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59218 Gene

No Aliases found

Previous GeneCards Identifiers for PIR59218 Gene

  • GC17P008035

No data available for External Ids for PIR59218 Gene

Summaries for PIR59218 Gene

GeneCards Summary for PIR59218 Gene

PIR59218 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59218 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59218

Additional gene information for PIR59218 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59218 Gene

Genomics for PIR59218 Gene

GeneHancer (GH) Regulatory Elements for PIR59218 Gene

Promoters and enhancers for PIR59218 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J055874 Promoter/Enhancer 1 EPDnew ENCODE dbSUPER 650.7 +1.5 1501 2.1 POLR2A BMP5 PIR59218 PIR53614
GH06J055877 Enhancer 0.5 ENCODE dbSUPER 650.7 -1.0 -1017 0.9 CEBPB PIR59218 NPM1P36
GH06J055882 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -6.4 -6418 1.6 NFIB NEUROD1 FEZF1 RAD21 RFX5 RCOR1 FOS ZNF362 CEBPB REST PIR59218 NPM1P36
GH06J055901 Enhancer 0.5 ENCODE 0.3 -25.9 -25920 1.9 JUND JUN BCL6B FOSL2 FOS EP300 ZXDB PIR59218 NPM1P36
GH06J055879 Enhancer 0.2 dbSUPER 0.7 -3.0 -2989 1.1 PIR59218 NPM1P36
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59218 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59218 Gene

Genomic Locations for PIR59218 Gene
chr6:55,876,572-55,876,607
(GRCh38/hg38)
Size:
36 bases
Orientation:
Minus strand
chr17:8,029,101-8,029,134
(GRCh37/hg19)
Size:
34 bases
Orientation:
Plus strand

Genomic View for PIR59218 Gene

Genes around PIR59218 on UCSC Golden Path with GeneCards custom track

PIR59218 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59218 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59218 Gene

ORGUL Member Location for PIR59218 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59218 Gene

Function for PIR59218 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59218 Gene

Localization for PIR59218 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59218 Gene

Pathways & Interactions for PIR59218 Gene

SuperPathways for PIR59218 Gene

No Data Available

Interacting Proteins for PIR59218 Gene

Gene Ontology (GO) - Biological Process for PIR59218 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59218 Gene

Drugs & Compounds for PIR59218 Gene

No Compound Related Data Available

Transcripts for PIR59218 Gene

fRNAdb Secondary structures for PIR59218 Gene

  • FR159285
  • FR094411
  • FR034897

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59218 Gene

No ASD Table

Relevant External Links for PIR59218 Gene

GeneLoc Exon Structure for
PIR59218

No data available for mRNA/cDNA for PIR59218 Gene

Expression for PIR59218 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59218 Gene

Orthologs for PIR59218 Gene

No data available for Orthologs and Evolution for PIR59218 Gene

Paralogs for PIR59218 Gene

No data available for Paralogs for PIR59218 Gene

Variants for PIR59218 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59218 Gene

Disorders for PIR59218 Gene

No disorders were found for PIR59218 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59218 Gene

Publications for PIR59218 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59218 Gene

Sources for PIR59218 Gene

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