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Aliases for PIR59167 Gene

Subcategory (RNA class) for PIR59167 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR59167 Gene

No Aliases found

ORGUL Members for PIR59167 Gene

No data available for External Ids for PIR59167 Gene

Summaries for PIR59167 Gene

GeneCards Summary for PIR59167 Gene

PIR59167 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59167 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59167 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59167 Gene

Genomics for PIR59167 Gene

GeneHancer (GH) Regulatory Elements for PIR59167 Gene

Promoters and enhancers for PIR59167 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J004335 Enhancer 1 Ensembl ENCODE 650.7 +1.7 1726 0.4 RB1 MLX ARID4B ZNF2 RAD21 ZEB1 ZNF335 ARID2 SCRT2 ZNF143 PIR59167 LYAR NSG1
GH04J004332 Enhancer 0.5 ENCODE 650.7 -0.4 -361 0.6 BCOR RFX1 IKZF1 ZBTB11 ZFP36 ZMYM3 GABPA PIR59167 LYAR TMEM128 NSG1 ENSG00000248516
GH04J004327 Enhancer 1.1 Ensembl ENCODE 0.4 -5.7 -5737 0.8 HDAC1 ATF1 ARID4B SIN3A DMAP1 RAD21 ZNF48 RARA CHAMP1 ZNF614 LYAR TMEM128 ADRA2C NSG1 ENSG00000248516 PIR59167
GH04J004323 Enhancer 1 Ensembl ENCODE 0.4 -9.6 -9553 1.6 HDAC1 ATF1 ARNT ZBTB40 TCF12 ZNF766 GATA2 CAVIN1 ZBTB2 NCOA1 LYAR ZBTB49 TMEM128 ENSG00000248516 PIR59167
GH04J004339 Enhancer 0.8 ENCODE 0.4 +6.1 6066 0.1 BCOR MEIS2 PKNOX1 ATF1 TEAD4 TAL1 TCF12 CTBP1 GATA2 POLR2A NSG1 PIR59167
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR59167 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59167 Gene

Genomic Locations for PIR59167 Gene
chr4:4,333,657-4,333,683
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr4:4,335,384-4,335,410
(GRCh37/hg19)
Size:
27 bases
Orientation:
Plus strand

Genomic View for PIR59167 Gene

Genes around PIR59167 on UCSC Golden Path with GeneCards custom track

PIR59167 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59167 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59167 Gene

Function for PIR59167 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59167 Gene

Localization for PIR59167 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59167 Gene

Pathways & Interactions for PIR59167 Gene

SuperPathways for PIR59167 Gene

No Data Available

Interacting Proteins for PIR59167 Gene

Gene Ontology (GO) - Biological Process for PIR59167 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59167 Gene

Drugs & Compounds for PIR59167 Gene

No Compound Related Data Available

Transcripts for PIR59167 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59167 Gene

No ASD Table

Relevant External Links for PIR59167 Gene

GeneLoc Exon Structure for
PIR59167

No data available for mRNA/cDNA for PIR59167 Gene

Expression for PIR59167 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59167 Gene

Orthologs for PIR59167 Gene

No data available for Orthologs and Evolution for PIR59167 Gene

Paralogs for PIR59167 Gene

No data available for Paralogs for PIR59167 Gene

Variants for PIR59167 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59167 Gene

Disorders for PIR59167 Gene

No disorders were found for PIR59167 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59167 Gene

Publications for PIR59167 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59167 Gene

Sources for PIR59167 Gene

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