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Aliases for PIR59109 Gene

Subcategory (RNA class) for PIR59109 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR59109 Gene

No Aliases found

ORGUL Members for PIR59109 Gene

Previous GeneCards Identifiers for PIR59109 Gene

  • GC03M013206
  • GC03M013659
  • GC03M013784
  • GC03M013905
  • GC03M014019
  • GC03M014142
  • GC03M014269

No data available for External Ids for PIR59109 Gene

Summaries for PIR59109 Gene

GeneCards Summary for PIR59109 Gene

PIR59109 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59109 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR59109

Additional gene information for PIR59109 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59109 Gene

Genomics for PIR59109 Gene

GeneHancer (GH) Regulatory Elements for PIR59109 Gene

Promoters and enhancers for PIR59109 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I012867 Enhancer 1.4 FANTOM5 Ensembl ENCODE 550.8 +0.7 707 2 HDGF PKNOX1 ARNT ARID4B SIN3A ZNF2 POLR2B ZNF143 FOS SP3 GC03M014401 GC03M014417 GC03M014425 GC03M014438 GC03M014453 GC03M014454 GC03M014465 GC03P012869 PIR48953 PIR32651
GH03I012870 Enhancer 0.7 FANTOM5 ENCODE 550.8 -1.8 -1837 0.8 ATF1 CREB1 HNF4A ATF7 ATF2 CREM GC03M014421 GC03M014422 GC03M014425 GC03M014440 GC03M014442 GC03M014449 GC03M014465 GC03P012869 GC03P012871 PIR40824
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59109 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59109 Gene

Genomic Locations for PIR59109 Gene
chr3:12,869,281-12,869,312
(GRCh38/hg38)
Size:
32 bases
Orientation:
Minus strand

Genomic View for PIR59109 Gene

Genes around PIR59109 on UCSC Golden Path with GeneCards custom track

PIR59109 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59109 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR59109 Gene

ORGUL Member Location for PIR59109 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59109 Gene

Proteins for PIR59109 Gene

Post-translational modifications for PIR59109 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59109 Gene

Domains & Families for PIR59109 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59109 Gene

Function for PIR59109 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59109 Gene

Localization for PIR59109 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59109 Gene

Pathways & Interactions for PIR59109 Gene

SuperPathways for PIR59109 Gene

No Data Available

Interacting Proteins for PIR59109 Gene

Gene Ontology (GO) - Biological Process for PIR59109 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59109 Gene

Drugs & Compounds for PIR59109 Gene

No Compound Related Data Available

Transcripts for PIR59109 Gene

fRNAdb Secondary structures for PIR59109 Gene

  • FR126355

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59109 Gene

No ASD Table

Relevant External Links for PIR59109 Gene

GeneLoc Exon Structure for
PIR59109

No data available for mRNA/cDNA for PIR59109 Gene

Expression for PIR59109 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59109 Gene

Orthologs for PIR59109 Gene

No data available for Orthologs and Evolution for PIR59109 Gene

Paralogs for PIR59109 Gene

No data available for Paralogs for PIR59109 Gene

Variants for PIR59109 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59109 Gene

Disorders for PIR59109 Gene

No disorders were found for PIR59109 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59109 Gene

Publications for PIR59109 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59109 Gene

Sources for PIR59109 Gene

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