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Aliases for PIR59102 Gene

Subcategory (RNA class) for PIR59102 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59102 Gene

No Aliases found

ORGUL Members for PIR59102 Gene

Previous GeneCards Identifiers for PIR59102 Gene

  • GC06M116600

No data available for External Ids for PIR59102 Gene

Summaries for PIR59102 Gene

GeneCards Summary for PIR59102 Gene

PIR59102 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59102 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59102 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59102 Gene

Genomics for PIR59102 Gene

GeneHancer (GH) Regulatory Elements for PIR59102 Gene

Promoters and enhancers for PIR59102 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I116276 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 550.8 +0.5 523 5.6 HDGF FOXA2 SMAD1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 TSPYL1 ENSG00000240050 PIR59102 DSE CALHM6 TSPYL4 CALHM4 TRAPPC3L KRT18P22 CBX3P9
GH06I116268 Enhancer 1.1 Ensembl ENCODE 0.4 +11.1 11107 0.8 ARID4B BRCA1 SLC30A9 ARID2 ZNF143 ATF7 NCOA1 REST PPARG KAT8 CALHM4 KPNA5 TRAPPC3L CBX3P9 CALHM6 KRT18P22 ENSG00000244158 ENSG00000234117 ENSG00000237021 GC06P116262
GH06I116271 Enhancer 0.4 dbSUPER 0.4 +6.8 6843 2 ZNF664 SRF PRDM10 TSPYL4 CALHM4 TRAPPC3L ENSG00000234117 CBX3P9 CALHM6 KRT18P22 ENSG00000244158 TSPYL1 PIR59102
GH06I116264 Enhancer 0.4 ENCODE 0.4 +14.5 14532 0.7 JUND FOXA1 CALHM4 ENSG00000234117 TRAPPC3L RSPH4A GC06P116262 PIR59102 DSE
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59102 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59102 Gene

Genomic Locations for PIR59102 Gene
chr6:116,279,682-116,279,708
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr6:116,600,845-116,600,871
(GRCh37/hg19)

Genomic View for PIR59102 Gene

Genes around PIR59102 on UCSC Golden Path with GeneCards custom track

PIR59102 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59102 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59102 Gene

Proteins for PIR59102 Gene

Post-translational modifications for PIR59102 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59102 Gene

Domains & Families for PIR59102 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59102 Gene

Function for PIR59102 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59102 Gene

Localization for PIR59102 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59102 Gene

Pathways & Interactions for PIR59102 Gene

SuperPathways for PIR59102 Gene

No Data Available

Interacting Proteins for PIR59102 Gene

Gene Ontology (GO) - Biological Process for PIR59102 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59102 Gene

Drugs & Compounds for PIR59102 Gene

No Compound Related Data Available

Transcripts for PIR59102 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59102 Gene

No ASD Table

Relevant External Links for PIR59102 Gene

GeneLoc Exon Structure for
PIR59102

No data available for mRNA/cDNA for PIR59102 Gene

Expression for PIR59102 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59102 Gene

Orthologs for PIR59102 Gene

No data available for Orthologs and Evolution for PIR59102 Gene

Paralogs for PIR59102 Gene

No data available for Paralogs for PIR59102 Gene

Variants for PIR59102 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59102 Gene

Disorders for PIR59102 Gene

No disorders were found for PIR59102 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59102 Gene

Publications for PIR59102 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59102 Gene

Sources for PIR59102 Gene

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