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Aliases for PIR59042 Gene

Subcategory (RNA class) for PIR59042 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR59042 Gene

No Aliases found

ORGUL Members for PIR59042 Gene

Previous GeneCards Identifiers for PIR59042 Gene

  • GC07P100512

No data available for External Ids for PIR59042 Gene

Summaries for PIR59042 Gene

GeneCards Summary for PIR59042 Gene

PIR59042 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR59042 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR59042 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR59042 Gene

Genomics for PIR59042 Gene

GeneHancer (GH) Regulatory Elements for PIR59042 Gene

Promoters and enhancers for PIR59042 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I100913 Enhancer 0.8 ENCODE 550.8 -0.5 -483 1.1 FOXA2 ZNF529 ZFP64 RAD21 YY1 ZNF213 ZNF202 ZNF680 ZNF654 RXRA PIR59042 SRRT GIGYF1 STAG3L5P ZNF3 ENSG00000242798 TRIM4 AP4M1 PILRB PPP1R35
GH07I100909 Enhancer 0.9 Ensembl ENCODE 0.8 -2.9 -2877 3.5 PKNOX1 ATF1 FOXA2 TEAD4 ZNF384 YY1 NCOA2 ZNF121 GATA3 NFE2 ACHE SLC12A9 MUC3A COPS6 MBLAC1 PILRB UFSP1 FIS1 MOSPD3 LOC102724094
GH07I100916 Enhancer 0.3 Ensembl 0.8 +2.0 2026 0.7 FOXA1 LOC102724094 PIR59042 RPS29P15
GH07I100924 Enhancer 0.2 FANTOM5 0.4 +9.8 9847 0.1 ACHE UFSP1 MUC3A MUC12 MUC17 NAT16 RPS29P15 PIR59042
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR59042 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR59042 Gene

Genomic Locations for PIR59042 Gene
chr7:100,914,577-100,914,603
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr7:100,512,197-100,512,223
(GRCh37/hg19)

Genomic View for PIR59042 Gene

Genes around PIR59042 on UCSC Golden Path with GeneCards custom track

PIR59042 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR59042 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR59042 Gene

Proteins for PIR59042 Gene

Post-translational modifications for PIR59042 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR59042 Gene

Domains & Families for PIR59042 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR59042 Gene

Function for PIR59042 Gene

Phenotypes From GWAS Catalog for PIR59042 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR59042 Gene

Localization for PIR59042 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR59042 Gene

Pathways & Interactions for PIR59042 Gene

SuperPathways for PIR59042 Gene

No Data Available

Interacting Proteins for PIR59042 Gene

Gene Ontology (GO) - Biological Process for PIR59042 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR59042 Gene

Drugs & Compounds for PIR59042 Gene

No Compound Related Data Available

Transcripts for PIR59042 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR59042 Gene

No ASD Table

Relevant External Links for PIR59042 Gene

GeneLoc Exon Structure for
PIR59042

No data available for mRNA/cDNA for PIR59042 Gene

Expression for PIR59042 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR59042 Gene

Orthologs for PIR59042 Gene

No data available for Orthologs and Evolution for PIR59042 Gene

Paralogs for PIR59042 Gene

No data available for Paralogs for PIR59042 Gene

Variants for PIR59042 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR59042 Gene

Disorders for PIR59042 Gene

No disorders were found for PIR59042 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR59042 Gene

Publications for PIR59042 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR59042 Gene

Sources for PIR59042 Gene

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