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Aliases for PIR58995 Gene

Subcategory (RNA class) for PIR58995 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58995 Gene

No Aliases found

ORGUL Members for PIR58995 Gene

Previous GeneCards Identifiers for PIR58995 Gene

  • GC02M224895

No data available for External Ids for PIR58995 Gene

Summaries for PIR58995 Gene

GeneCards Summary for PIR58995 Gene

PIR58995 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58995 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58995 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58995 Gene

Genomics for PIR58995 Gene

GeneHancer (GH) Regulatory Elements for PIR58995 Gene

Promoters and enhancers for PIR58995 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J224030 Enhancer 0.6 ENCODE 650.7 +0.3 346 1.3 L3MBTL2 ZNF740 MAX NFYC USF2 MNT REST MITF RAD51 NFYB PIR58995 SERPINE2 ENSG00000228802
GH02J224037 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 0.4 -7.8 -7773 2.5 ARID4B SIN3A ZNF48 GLIS2 SP3 MXD4 MIER2 NFIL3 MYRF CTCF SERPINE2 PIR58995
GH02J224025 Enhancer 0.9 Ensembl ENCODE 0.7 +5.0 4971 1.9 MEIS2 ATF1 PKNOX1 USF1 MAX SIN3A IRF4 POLR2A IKZF2 RUNX3 SERPINE2 PIR58995 ENSG00000228802
GH02J224023 Enhancer 0.8 ENCODE 0.4 +8.0 7962 0.2 ELF3 FOXA2 THRB ZNF48 RARA FOS THAP11 NFKBIZ ZBTB25 SP1 PIR58995 SERPINE2 ENSG00000228802
GH02J224008 Enhancer 0.9 Ensembl ENCODE 0.3 +22.0 21987 2.2 ZNF614 ZNF316 POLR2A HNF4G PRPF4 RCOR1 NFE2 MAFK CHD2 NFE2L2 SERPINE2 PIR58995 ENSG00000228802
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58995 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58995 Gene

Genomic Locations for PIR58995 Gene
chr2:224,031,272-224,031,301
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr2:224,895,989-224,896,018
(GRCh37/hg19)
Size:
30 bases
Orientation:
Minus strand

Genomic View for PIR58995 Gene

Genes around PIR58995 on UCSC Golden Path with GeneCards custom track

PIR58995 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58995 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58995 Gene

Function for PIR58995 Gene

Phenotypes From GWAS Catalog for PIR58995 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58995 Gene

Localization for PIR58995 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58995 Gene

Pathways & Interactions for PIR58995 Gene

SuperPathways for PIR58995 Gene

No Data Available

Interacting Proteins for PIR58995 Gene

Gene Ontology (GO) - Biological Process for PIR58995 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58995 Gene

Drugs & Compounds for PIR58995 Gene

No Compound Related Data Available

Transcripts for PIR58995 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58995 Gene

No ASD Table

Relevant External Links for PIR58995 Gene

GeneLoc Exon Structure for
PIR58995

No data available for mRNA/cDNA for PIR58995 Gene

Expression for PIR58995 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58995 Gene

Orthologs for PIR58995 Gene

No data available for Orthologs and Evolution for PIR58995 Gene

Paralogs for PIR58995 Gene

No data available for Paralogs for PIR58995 Gene

Variants for PIR58995 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58995 Gene

Disorders for PIR58995 Gene

No disorders were found for PIR58995 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58995 Gene

Publications for PIR58995 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58995 Gene

Sources for PIR58995 Gene

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