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Aliases for PIR58994 Gene

Subcategory (RNA class) for PIR58994 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58994 Gene

No Aliases found

ORGUL Members for PIR58994 Gene

Previous GeneCards Identifiers for PIR58994 Gene

  • GC09P134353

No data available for External Ids for PIR58994 Gene

Summaries for PIR58994 Gene

GeneCards Summary for PIR58994 Gene

PIR58994 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58994 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58994 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58994 Gene

Genomics for PIR58994 Gene

GeneHancer (GH) Regulatory Elements for PIR58994 Gene

Promoters and enhancers for PIR58994 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I131478 Enhancer 0.6 ENCODE 550.8 +0.7 683 0.2 CTCF ZNF740 TRIM22 RAD21 SCRT2 VEZF1 SMC3 ZNF143 ZNF444 PIR58994 PIR59215 GC09P131494 GC09P131517 GC09P131518 PRRC2B
GH09I131440 Enhancer 0.7 ENCODE dbSUPER 0.3 -36.3 -36316 1.3 POLR2A IKZF1 DPF2 PRDM4 IKZF2 IRF4 SPI1 PRRC2B SNORD62A SNORD62B ENSG00000176868 POMT1 LOC105376301 ENSG00000246851 NUP214 PLPP7 PIR53214
GH09I131436 Enhancer 0.7 ENCODE dbSUPER 0.3 -40.3 -40327 3.1 USF1 GLIS1 ZNF239 MAX POU5F1 USF2 ZIC2 POMT1 ENSG00000176868 PIR53214 PRRC2B PIR58994 GC09P131226
GH09I131431 Enhancer 0.7 ENCODE dbSUPER 0.3 -44.6 -44594 2.6 GLIS1 HLF CEBPB FOS ZIC2 ZBTB12 POMT1 PRRC2B SNORD62A SNORD62B ENSG00000176868 UCK1 PIR53214 PIR58994 GC09P131226
GH09I131429 Promoter/Enhancer 1 EPDnew ENCODE 0.2 -48.2 -48154 1.1 SCRT1 GLIS1 SCRT2 ZNF398 ZNF600 ZIC2 PRDM1 PRRC2B SNORD62A SNORD62B POMT1 LOC105376301 ENSG00000176868 PIR53214 PIR58994 GC09P131226
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58994 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58994 Gene

Genomic Locations for PIR58994 Gene
chr9:131,477,866-131,477,893
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr9:134,353,253-134,353,280
(GRCh37/hg19)

Genomic View for PIR58994 Gene

Genes around PIR58994 on UCSC Golden Path with GeneCards custom track

PIR58994 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58994 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58994 Gene

Proteins for PIR58994 Gene

Post-translational modifications for PIR58994 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58994 Gene

Domains & Families for PIR58994 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58994 Gene

Function for PIR58994 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58994 Gene

Localization for PIR58994 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58994 Gene

Pathways & Interactions for PIR58994 Gene

SuperPathways for PIR58994 Gene

No Data Available

Interacting Proteins for PIR58994 Gene

Gene Ontology (GO) - Biological Process for PIR58994 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58994 Gene

Drugs & Compounds for PIR58994 Gene

No Compound Related Data Available

Transcripts for PIR58994 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58994 Gene

No ASD Table

Relevant External Links for PIR58994 Gene

GeneLoc Exon Structure for
PIR58994

No data available for mRNA/cDNA for PIR58994 Gene

Expression for PIR58994 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58994 Gene

Orthologs for PIR58994 Gene

No data available for Orthologs and Evolution for PIR58994 Gene

Paralogs for PIR58994 Gene

No data available for Paralogs for PIR58994 Gene

Variants for PIR58994 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58994 Gene

Disorders for PIR58994 Gene

No disorders were found for PIR58994 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58994 Gene

Publications for PIR58994 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58994 Gene

Sources for PIR58994 Gene

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