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Aliases for PIR58990 Gene

Subcategory (RNA class) for PIR58990 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58990 Gene

No Aliases found

ORGUL Members for PIR58990 Gene

Previous GeneCards Identifiers for PIR58990 Gene

  • GC02P122753

No data available for External Ids for PIR58990 Gene

Summaries for PIR58990 Gene

GeneCards Summary for PIR58990 Gene

PIR58990 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58990 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58990 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58990 Gene

Genomics for PIR58990 Gene

GeneHancer (GH) Regulatory Elements for PIR58990 Gene

Promoters and enhancers for PIR58990 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J121998 Enhancer 1 ENCODE dbSUPER 0.7 +3.5 3471 1 SMAD1 NFIB FEZF1 TCF12 RCOR1 ATF7 ZNF148 PRDM6 NFIC KLF16 PIR58990 GC02M121999 LOC105373592
GH02J121989 Enhancer 0.3 dbSUPER 0.7 -2.0 -2010 8.9 CTCF PIR58990 GC02M121985 PIR41956 LOC105373592
GH02J122005 Enhancer 0.5 dbSUPER 0.4 +12.0 11961 4.5 OSR2 ZNF341 CBFA2T3 EZH2 GC02M121999 PIR58990 LOC105373592
GH02J121984 Enhancer 0.4 dbSUPER 0.4 -9.9 -9941 3.7 NFIB EBF1 ZNF781 GC02M121985 PIR41956 PIR58990 LOC105373592
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58990 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58990 Gene

Genomic Locations for PIR58990 Gene
chr2:121,995,979-121,996,006
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr2:122,753,555-122,753,582
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR58990 Gene

Genes around PIR58990 on UCSC Golden Path with GeneCards custom track

PIR58990 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58990 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58990 Gene

Function for PIR58990 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58990 Gene

Localization for PIR58990 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58990 Gene

Pathways & Interactions for PIR58990 Gene

SuperPathways for PIR58990 Gene

No Data Available

Interacting Proteins for PIR58990 Gene

Gene Ontology (GO) - Biological Process for PIR58990 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58990 Gene

Drugs & Compounds for PIR58990 Gene

No Compound Related Data Available

Transcripts for PIR58990 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58990 Gene

No ASD Table

Relevant External Links for PIR58990 Gene

GeneLoc Exon Structure for
PIR58990

No data available for mRNA/cDNA for PIR58990 Gene

Expression for PIR58990 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58990 Gene

Orthologs for PIR58990 Gene

No data available for Orthologs and Evolution for PIR58990 Gene

Paralogs for PIR58990 Gene

No data available for Paralogs for PIR58990 Gene

Variants for PIR58990 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58990 Gene

Disorders for PIR58990 Gene

No disorders were found for PIR58990 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58990 Gene

Publications for PIR58990 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58990 Gene

Sources for PIR58990 Gene

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