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Aliases for PIR58969 Gene

Subcategory (RNA class) for PIR58969 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58969 Gene

No Aliases found

ORGUL Members for PIR58969 Gene

Previous GeneCards Identifiers for PIR58969 Gene

  • GC01M001502
  • GC01M001504
  • GC01M001505
  • GC01M001506
  • GC01M001507

No data available for External Ids for PIR58969 Gene

Summaries for PIR58969 Gene

GeneCards Summary for PIR58969 Gene

PIR58969 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58969 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58969 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58969 Gene

Genomics for PIR58969 Gene

GeneHancer (GH) Regulatory Elements for PIR58969 Gene

Promoters and enhancers for PIR58969 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I003081 Enhancer 0.2 dbSUPER 550.8 -0.3 -295 3.5 PIR58969 PRDM16 MIR4251
GH01I003065 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +12.2 12169 9.4 ZSCAN4 ZNF48 RAD21 RARA ZNF335 GLIS2 ZNF143 THAP11 EGR2 ZNF362 PRDM16 LOC100420339 MORN1 FAAP20 TP73-AS1 ACTRT2 LOC100129534 ENSG00000234396 LINC00982 PIR58969
GH01I003075 Enhancer 0.5 dbSUPER 0.8 +4.8 4836 4.5 ZFHX2 GLIS1 HLF KLF9 ZIC2 ACTRT2 PIR58969 PRDM16 LOC100420339
GH01I003085 Enhancer 0.3 dbSUPER 0.8 -3.2 -3247 0.8 KLF1 PIR58969 PRDM16 MIR4251
GH01I003115 Enhancer 0.8 dbSUPER 0.3 -32.6 -32589 0.4 SOX13 TFAP4 KLF1 FOXA2 MLX ZNF644 RAD21 TEAD3 POLR2A HNF4G MIR4251 PIR58969 PRDM16
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58969 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58969 Gene

Genomic Locations for PIR58969 Gene
chr1:3,082,644-3,082,672
(GRCh38/hg38)
Size:
29 bases
Orientation:
Minus strand
chr1:1,499,604-1,499,632
(GRCh37/hg19)

Genomic View for PIR58969 Gene

Genes around PIR58969 on UCSC Golden Path with GeneCards custom track

PIR58969 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58969 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58969 Gene

Proteins for PIR58969 Gene

Post-translational modifications for PIR58969 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58969 Gene

Domains & Families for PIR58969 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58969 Gene

Function for PIR58969 Gene

Phenotypes From GWAS Catalog for PIR58969 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58969 Gene

Localization for PIR58969 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58969 Gene

Pathways & Interactions for PIR58969 Gene

SuperPathways for PIR58969 Gene

No Data Available

Interacting Proteins for PIR58969 Gene

Gene Ontology (GO) - Biological Process for PIR58969 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58969 Gene

Drugs & Compounds for PIR58969 Gene

No Compound Related Data Available

Transcripts for PIR58969 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58969 Gene

No ASD Table

Relevant External Links for PIR58969 Gene

GeneLoc Exon Structure for
PIR58969

No data available for mRNA/cDNA for PIR58969 Gene

Expression for PIR58969 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58969 Gene

Orthologs for PIR58969 Gene

No data available for Orthologs and Evolution for PIR58969 Gene

Paralogs for PIR58969 Gene

No data available for Paralogs for PIR58969 Gene

Variants for PIR58969 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58969 Gene

Disorders for PIR58969 Gene

No disorders were found for PIR58969 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58969 Gene

Publications for PIR58969 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58969 Gene

Sources for PIR58969 Gene

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