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Aliases for PIR58963 Gene

Subcategory (RNA class) for PIR58963 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58963 Gene

No Aliases found

ORGUL Members for PIR58963 Gene

No data available for External Ids for PIR58963 Gene

Summaries for PIR58963 Gene

GeneCards Summary for PIR58963 Gene

PIR58963 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58963 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58963 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58963 Gene

Genomics for PIR58963 Gene

GeneHancer (GH) Regulatory Elements for PIR58963 Gene

Promoters and enhancers for PIR58963 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J020849 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 650.7 +1.6 1614 3.1 ARNT ARID4B ZNF2 YY1 SLC30A9 ARID2 ZNF143 DEK NFKBIZ RXRA PIR58963 THUMPD1 LYRM1 DCUN1D3 DNAH3 TMEM159 GC16P020829 REXO5 ERI2
GH16J020864 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.0 16977 3.6 PKNOX1 FEZF1 BATF IRF4 ZNF335 TCF12 ZNF23 FOS ETV6 ATF7 DCUN1D3 ACSM3 THUMPD1 LYRM1 TMEM159 DNAH3 PIR58963 ERI2 GC16P020829
GH16J020855 Promoter/Enhancer 1.1 EPDnew dbSUPER 0.4 +5.8 5765 0.1 SCRT1 FOXA3 CEBPG SKI SCRT2 NR2F6 KDM1A CREM DCUN1D3 LYRM1 TMEM159 DNAH3 PIR58963 GC16P020829 ERI2
GH16J020859 Promoter/Enhancer 1 EPDnew dbSUPER 0.4 +10.0 10036 0.1 LCORL ZNF362 MAFG EMSY DCUN1D3 LYRM1 DNAH3 TMEM159 PIR58963 GC16P020829 ERI2
GH16J020871 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 +24.2 24191 3.9 PKNOX1 FOXA2 SMAD1 ARID4B IRF4 YY1 TCF12 ATF7 RUNX3 RXRA ACSM3 LYRM1 DCUN1D3 THUMPD1 PIR58963 ERI2 GC16P020829
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58963 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58963 Gene

Genomic Locations for PIR58963 Gene
chr16:20,849,523-20,849,552
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr16:20,860,845-20,860,874
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR58963 Gene

Genes around PIR58963 on UCSC Golden Path with GeneCards custom track

PIR58963 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58963 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58963 Gene

Function for PIR58963 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58963 Gene

Localization for PIR58963 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58963 Gene

Pathways & Interactions for PIR58963 Gene

SuperPathways for PIR58963 Gene

No Data Available

Interacting Proteins for PIR58963 Gene

Gene Ontology (GO) - Biological Process for PIR58963 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58963 Gene

Drugs & Compounds for PIR58963 Gene

No Compound Related Data Available

Transcripts for PIR58963 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58963 Gene

No ASD Table

Relevant External Links for PIR58963 Gene

GeneLoc Exon Structure for
PIR58963

No data available for mRNA/cDNA for PIR58963 Gene

Expression for PIR58963 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58963 Gene

Orthologs for PIR58963 Gene

No data available for Orthologs and Evolution for PIR58963 Gene

Paralogs for PIR58963 Gene

No data available for Paralogs for PIR58963 Gene

Variants for PIR58963 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58963 Gene

Disorders for PIR58963 Gene

No disorders were found for PIR58963 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58963 Gene

Publications for PIR58963 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58963 Gene

Sources for PIR58963 Gene

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