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Aliases for PIR58956 Gene

Subcategory (RNA class) for PIR58956 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58956 Gene

No Aliases found

ORGUL Members for PIR58956 Gene

Previous GeneCards Identifiers for PIR58956 Gene

  • GC22P025437
  • GC22P025439
  • GC22P025444

No data available for External Ids for PIR58956 Gene

Summaries for PIR58956 Gene

GeneCards Summary for PIR58956 Gene

PIR58956 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58956 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58956 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58956 Gene

Genomics for PIR58956 Gene

GeneHancer (GH) Regulatory Elements for PIR58956 Gene

Promoters and enhancers for PIR58956 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I025025 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -14.1 -14075 3.2 BCOR CTCF KLF1 JUN ARID4B KLF17 ZMYM3 ZNF644 RAD21 ZNF664 TMEM211 ENSG00000199783 ENSG00000279548 PIR58956 KIAA1671
GH22I025048 Enhancer 0.7 ENCODE 0.4 +7.9 7931 0.2 CTCF SAP130 ZNF449 ARID4B KLF17 MAX RAD21 BCL11B ZKSCAN1 TEAD3 TMEM211 ENSG00000279006 PIR58956 KIAA1671
GH22I025028 Enhancer 0.7 ENCODE dbSUPER 0.4 -12.3 -12269 0.2 CTCF ARID4B ZNF143 SMC3 REST RAD21 TMEM211 ENSG00000279548 PIR58956 KIAA1671
GH22I025031 Enhancer 0.5 dbSUPER 0.4 -8.6 -8562 1.1 ZFHX2 GLIS1 SP7 EGR2 LOC100128531 PIR58956 ENSG00000279548 KIAA1671
GH22I025024 Enhancer 0.5 dbSUPER 0.4 -16.0 -15972 0.6 OSR2 ZNF664 ZSCAN16 ZNF623 ENSG00000279548 PIR58956 KIAA1671
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58956 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58956 Gene

Genomic Locations for PIR58956 Gene
chr22:25,040,958-25,040,984
(GRCh38/hg38)
Size:
27 bases
Orientation:
Plus strand
chr22:25,436,925-25,436,951
(GRCh37/hg19)

Genomic View for PIR58956 Gene

Genes around PIR58956 on UCSC Golden Path with GeneCards custom track

PIR58956 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58956 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58956 Gene

Proteins for PIR58956 Gene

Post-translational modifications for PIR58956 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58956 Gene

Domains & Families for PIR58956 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58956 Gene

Function for PIR58956 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58956 Gene

Localization for PIR58956 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58956 Gene

Pathways & Interactions for PIR58956 Gene

SuperPathways for PIR58956 Gene

No Data Available

Interacting Proteins for PIR58956 Gene

Gene Ontology (GO) - Biological Process for PIR58956 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58956 Gene

Drugs & Compounds for PIR58956 Gene

No Compound Related Data Available

Transcripts for PIR58956 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58956 Gene

No ASD Table

Relevant External Links for PIR58956 Gene

GeneLoc Exon Structure for
PIR58956

No data available for mRNA/cDNA for PIR58956 Gene

Expression for PIR58956 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58956 Gene

Orthologs for PIR58956 Gene

No data available for Orthologs and Evolution for PIR58956 Gene

Paralogs for PIR58956 Gene

No data available for Paralogs for PIR58956 Gene

Variants for PIR58956 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58956 Gene

Disorders for PIR58956 Gene

No disorders were found for PIR58956 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58956 Gene

Publications for PIR58956 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58956 Gene

Sources for PIR58956 Gene

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