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Aliases for PIR58946 Gene

Subcategory (RNA class) for PIR58946 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58946 Gene

No Aliases found

ORGUL Members for PIR58946 Gene

Previous GeneCards Identifiers for PIR58946 Gene

  • GC14M024505

No data available for External Ids for PIR58946 Gene

Summaries for PIR58946 Gene

GeneCards Summary for PIR58946 Gene

PIR58946 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58946 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58946 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58946 Gene

Genomics for PIR58946 Gene

GeneHancer (GH) Regulatory Elements for PIR58946 Gene

Promoters and enhancers for PIR58946 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J024035 Promoter/Enhancer 1.5 Ensembl ENCODE 650.7 +0.1 102 1.7 HDGF ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 ZNF213 PIR58946 ACIN1 DHRS4L1 RNA5SP383 KHNYN TM9SF1 LINC00596 RN7SKP205 LOC105370409 C14orf119
GH14J024032 Enhancer 1.1 Ensembl ENCODE 0.7 +3.4 3364 1 PKNOX1 FOXA2 MLX ARID4B SIN3A YY1 TCF12 FOS NFKBIZ RXRA DHRS4L2 DHRS4 PCK2 NRL PIR58946 DHRS4L1 ENSG00000285467
GH14J024013 Enhancer 1.1 Ensembl ENCODE 0.3 +22.6 22598 0.6 ARNT ARID4B ZNF2 ZNF48 ZNF121 ARID2 ZNF143 RUNX3 NFKBIZ SP5 CARMIL3 REC8 DHRS4L1 PIR58946 ENSG00000285467
GH14J024049 Enhancer 0.4 Ensembl 0.4 -12.7 -12702 0.4 IKZF1 IKZF2 SPI1 CARMIL3 PIR58946 DHRS4L1 ENSG00000285467
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58946 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58946 Gene

Genomic Locations for PIR58946 Gene
chr14:24,036,672-24,036,699
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr14:24,505,881-24,505,908
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR58946 Gene

Genes around PIR58946 on UCSC Golden Path with GeneCards custom track

PIR58946 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58946 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58946 Gene

Function for PIR58946 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58946 Gene

Localization for PIR58946 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58946 Gene

Pathways & Interactions for PIR58946 Gene

SuperPathways for PIR58946 Gene

No Data Available

Interacting Proteins for PIR58946 Gene

Gene Ontology (GO) - Biological Process for PIR58946 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58946 Gene

Drugs & Compounds for PIR58946 Gene

No Compound Related Data Available

Transcripts for PIR58946 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58946 Gene

No ASD Table

Relevant External Links for PIR58946 Gene

GeneLoc Exon Structure for
PIR58946

No data available for mRNA/cDNA for PIR58946 Gene

Expression for PIR58946 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58946 Gene

Orthologs for PIR58946 Gene

No data available for Orthologs and Evolution for PIR58946 Gene

Paralogs for PIR58946 Gene

No data available for Paralogs for PIR58946 Gene

Variants for PIR58946 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58946 Gene

Disorders for PIR58946 Gene

No disorders were found for PIR58946 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58946 Gene

Publications for PIR58946 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58946 Gene

Sources for PIR58946 Gene

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