Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PIR58934 Gene

Subcategory (RNA class) for PIR58934 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58934 Gene

No Aliases found

ORGUL Members for PIR58934 Gene

Previous GeneCards Identifiers for PIR58934 Gene

  • GC09P095376

No data available for External Ids for PIR58934 Gene

Summaries for PIR58934 Gene

GeneCards Summary for PIR58934 Gene

PIR58934 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58934 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58934 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58934 Gene

Genomics for PIR58934 Gene

GeneHancer (GH) Regulatory Elements for PIR58934 Gene

Promoters and enhancers for PIR58934 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I092613 Enhancer 0.4 ENCODE dbSUPER 550.8 -0.8 -766 0.1 PIR42073 PIR58934 GC09P092539 CENPP
GH09I092615 Enhancer 0.2 dbSUPER 550.8 +0.5 484 0.5 PIR42073 PIR43015 PIR58934 PHF2 ECM2 IPPK CENPP
GH09I092607 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.8 -3.6 -3643 5.6 SMAD1 MLX ZNF195 THRB RARA ZNF350 RCOR1 ZNF214 ZNF174 REST LINC00475 PHF2 NOL8 CENPP IARS ZNF484 MTND4P15 IPPK CARD19 PIR58934
GH09I092608 Enhancer 0.9 ENCODE dbSUPER 0.4 -6.6 -6582 0.2 SMAD1 NFIB ZNF195 ZNF776 ZNF350 ZNF214 ZNF174 ZNF571 ZNF621 ZNF398 LINC00475 PHF2 NOL8 CENPP IARS ZNF484 MTND4P15 PIR58934 GC09P092539
GH09I092599 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -13.2 -13162 3.3 JUND PKNOX1 GATA3 ZNF692 CENPP FGD3 PHF2 PIR58934 GC09P092539
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58934 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58934 Gene

Genomic Locations for PIR58934 Gene
chr9:92,613,836-92,613,865
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr9:95,376,118-95,376,147
(GRCh37/hg19)

Genomic View for PIR58934 Gene

Genes around PIR58934 on UCSC Golden Path with GeneCards custom track

PIR58934 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58934 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58934 Gene

Proteins for PIR58934 Gene

Post-translational modifications for PIR58934 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58934 Gene

Domains & Families for PIR58934 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58934 Gene

Function for PIR58934 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58934 Gene

Localization for PIR58934 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58934 Gene

Pathways & Interactions for PIR58934 Gene

SuperPathways for PIR58934 Gene

No Data Available

Interacting Proteins for PIR58934 Gene

Gene Ontology (GO) - Biological Process for PIR58934 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58934 Gene

Drugs & Compounds for PIR58934 Gene

No Compound Related Data Available

Transcripts for PIR58934 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58934 Gene

No ASD Table

Relevant External Links for PIR58934 Gene

GeneLoc Exon Structure for
PIR58934

No data available for mRNA/cDNA for PIR58934 Gene

Expression for PIR58934 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58934 Gene

Orthologs for PIR58934 Gene

No data available for Orthologs and Evolution for PIR58934 Gene

Paralogs for PIR58934 Gene

No data available for Paralogs for PIR58934 Gene

Variants for PIR58934 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58934 Gene

Disorders for PIR58934 Gene

No disorders were found for PIR58934 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58934 Gene

Publications for PIR58934 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58934 Gene

Sources for PIR58934 Gene

Content
Loading form....