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Aliases for PIR58932 Gene

Subcategory (RNA class) for PIR58932 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58932 Gene

No Aliases found

ORGUL Members for PIR58932 Gene

No data available for External Ids for PIR58932 Gene

Summaries for PIR58932 Gene

GeneCards Summary for PIR58932 Gene

PIR58932 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58932 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58932 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58932 Gene

Genomics for PIR58932 Gene

GeneHancer (GH) Regulatory Elements for PIR58932 Gene

Promoters and enhancers for PIR58932 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I001888 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 550.8 +1.9 1915 0.9 RXRA TAF1 HLF ZFP64 CEBPB CEBPG RAD21 CEBPA HNF4A ZBTB20 PIR58932 SIRPB1 SIRPA SIRPB2 NSFL1C ENSG00000276649 ENSG00000230839
GH20I001891 Enhancer 0.5 dbSUPER 550.8 -0.1 -75 0.4 ATF3 RXRA MAX HNF4A REST RAD21 YY1 PIR58932 SIRPA ENSG00000276649
GH20I001892 Enhancer 0.4 dbSUPER 550.8 -1.3 -1252 0.6 TSHZ1 ZIC2 SP7 PIR58932 SIRPA ENSG00000276649
GH20I001870 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +17.6 17604 6.5 HDGF PKNOX1 FOXA2 SMAD1 NFIB ZFP64 BMI1 BATF IRF4 RAD21 SIRPA SIRPB2 SNPH LOC100289473 SIRPB1 NSFL1C PIR58932 ENSG00000230839
GH20I001885 Enhancer 0.6 dbSUPER 0.8 +4.1 4123 2.6 ZNF664 GATA3 FOXA2 ZNF189 ZNF449 ELF1 ZNF623 ZKSCAN1 PIR58932 ENSG00000276649 ENSG00000230839
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58932 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58932 Gene

Genomic Locations for PIR58932 Gene
chr20:1,891,227-1,891,256
(GRCh38/hg38)
Size:
30 bases
Orientation:
Minus strand
chr20:1,871,873-1,871,902
(GRCh37/hg19)

Genomic View for PIR58932 Gene

Genes around PIR58932 on UCSC Golden Path with GeneCards custom track

PIR58932 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58932 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58932 Gene

Proteins for PIR58932 Gene

Post-translational modifications for PIR58932 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58932 Gene

Domains & Families for PIR58932 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58932 Gene

Function for PIR58932 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58932 Gene

Localization for PIR58932 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58932 Gene

Pathways & Interactions for PIR58932 Gene

SuperPathways for PIR58932 Gene

No Data Available

Interacting Proteins for PIR58932 Gene

Gene Ontology (GO) - Biological Process for PIR58932 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58932 Gene

Drugs & Compounds for PIR58932 Gene

No Compound Related Data Available

Transcripts for PIR58932 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58932 Gene

No ASD Table

Relevant External Links for PIR58932 Gene

GeneLoc Exon Structure for
PIR58932

No data available for mRNA/cDNA for PIR58932 Gene

Expression for PIR58932 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58932 Gene

Orthologs for PIR58932 Gene

No data available for Orthologs and Evolution for PIR58932 Gene

Paralogs for PIR58932 Gene

No data available for Paralogs for PIR58932 Gene

Variants for PIR58932 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58932 Gene

Disorders for PIR58932 Gene

No disorders were found for PIR58932 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58932 Gene

Publications for PIR58932 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58932 Gene

Sources for PIR58932 Gene

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