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Aliases for PIR58923 Gene

Subcategory (RNA class) for PIR58923 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR58923 Gene

No Aliases found

ORGUL Members for PIR58923 Gene

Previous GeneCards Identifiers for PIR58923 Gene

  • GC07M100283

No data available for External Ids for PIR58923 Gene

Summaries for PIR58923 Gene

GeneCards Summary for PIR58923 Gene

PIR58923 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58923 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR58923

Additional gene information for PIR58923 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58923 Gene

Genomics for PIR58923 Gene

GeneHancer (GH) Regulatory Elements for PIR58923 Gene

Promoters and enhancers for PIR58923 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J100685 Enhancer 0.6 dbSUPER 650.7 -0.1 -78 2.5 HIC1 NFIC SMAD5 NFIB PATZ1 RBM22 ZNF600 ZBTB33 PRDM1 PIR58923 GC07M100687 MOSPD3 GIGYF1
GH07J100672 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 0.4 +9.2 9239 8.6 CLOCK MLX ZFP64 FEZF1 DMAP1 YY1 ZNF213 E2F8 ZNF143 ZNF548 GNB2 GC07P100676 TRIM4 ZNF3 GIGYF1 SRRT PCOLCE STAG3L5P PPP1R35 ENSG00000242798
GH07J100690 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 0.4 -7.4 -7446 5.7 HDGF PKNOX1 CLOCK ARID4B SIN3A YY1 E2F8 ZNF143 SP5 REST GIGYF1 POP7 ZAN SRRT ZSCAN21 PCOLCE-AS1 AP4M1 ENSG00000242798 ZNF3 TRIM4
GH07J100681 Enhancer 0.7 dbSUPER 0.7 +3.7 3702 2 JUN SIN3A ZIC2 HIC1 FOSL1 ZFHX2 GLIS2 POLR2A EGR1 PATZ1 GIGYF1 ZAN TRIM4 SRRT PPP1R35 ZNF3 PILRB STAG3L5P ENSG00000242798 CNPY4
GH07J100687 Enhancer 0.7 ENCODE dbSUPER 0.7 -2.1 -2073 0.9 NCOA3 ZFHX2 EGR1 FOS EGR2 ZAN GIGYF1 MUC3A GC07M100687 PIR58923
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58923 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58923 Gene

Genomic Locations for PIR58923 Gene
chr7:100,686,201-100,686,231
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr7:100,283,824-100,283,854
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR58923 Gene

Genes around PIR58923 on UCSC Golden Path with GeneCards custom track

PIR58923 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58923 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR58923 Gene

ORGUL Member Location for PIR58923 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58923 Gene

Function for PIR58923 Gene

Phenotypes From GWAS Catalog for PIR58923 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58923 Gene

Localization for PIR58923 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58923 Gene

Pathways & Interactions for PIR58923 Gene

SuperPathways for PIR58923 Gene

No Data Available

Interacting Proteins for PIR58923 Gene

Gene Ontology (GO) - Biological Process for PIR58923 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58923 Gene

Drugs & Compounds for PIR58923 Gene

No Compound Related Data Available

Transcripts for PIR58923 Gene

fRNAdb Secondary structures for PIR58923 Gene

  • FR327173

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58923 Gene

No ASD Table

Relevant External Links for PIR58923 Gene

GeneLoc Exon Structure for
PIR58923

No data available for mRNA/cDNA for PIR58923 Gene

Expression for PIR58923 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58923 Gene

Orthologs for PIR58923 Gene

No data available for Orthologs and Evolution for PIR58923 Gene

Paralogs for PIR58923 Gene

No data available for Paralogs for PIR58923 Gene

Variants for PIR58923 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58923 Gene

Disorders for PIR58923 Gene

No disorders were found for PIR58923 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58923 Gene

Publications for PIR58923 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58923 Gene

Sources for PIR58923 Gene

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