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Aliases for PIR58920 Gene

Subcategory (RNA class) for PIR58920 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR58920 Gene

No Aliases found

Previous GeneCards Identifiers for PIR58920 Gene

  • GC05P180697
  • GC05P180736
  • GC05P180815
  • GC05P180847
  • GC05P180881
  • GC05P180920
  • GC05P180952

No data available for External Ids for PIR58920 Gene

Summaries for PIR58920 Gene

GeneCards Summary for PIR58920 Gene

PIR58920 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58920 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR58920

Additional gene information for PIR58920 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58920 Gene

Genomics for PIR58920 Gene

GeneHancer (GH) Regulatory Elements for PIR58920 Gene

Promoters and enhancers for PIR58920 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I180684 Enhancer 0.2 ENCODE 550.8 -1.2 -1189 1.2 GC05M180736 GC05M180737 GC05P181013 GC05P181014 GC05P181015 GC05P181016 GC05P181018 GC05P181020 GC05P181021 GC05P181022
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58920 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58920 Gene

Genomic Locations for PIR58920 Gene
chr5:180,685,768-180,685,805
(GRCh38/hg38)
Size:
38 bases
Orientation:
Plus strand
chr5:180,752,306-180,752,336
(GRCh37/hg19)

Genomic View for PIR58920 Gene

Genes around PIR58920 on UCSC Golden Path with GeneCards custom track

PIR58920 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58920 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR58920 Gene

ORGUL Member Location for PIR58920 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58920 Gene

Proteins for PIR58920 Gene

Post-translational modifications for PIR58920 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58920 Gene

Domains & Families for PIR58920 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58920 Gene

Function for PIR58920 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58920 Gene

Localization for PIR58920 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58920 Gene

Pathways & Interactions for PIR58920 Gene

SuperPathways for PIR58920 Gene

No Data Available

Interacting Proteins for PIR58920 Gene

Gene Ontology (GO) - Biological Process for PIR58920 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58920 Gene

Drugs & Compounds for PIR58920 Gene

No Compound Related Data Available

Transcripts for PIR58920 Gene

fRNAdb Secondary structures for PIR58920 Gene

  • FR081223
  • FR398942
  • FR297685
  • FR024328
  • FR319363

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58920 Gene

No ASD Table

Relevant External Links for PIR58920 Gene

GeneLoc Exon Structure for
PIR58920

No data available for mRNA/cDNA for PIR58920 Gene

Expression for PIR58920 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58920 Gene

Orthologs for PIR58920 Gene

No data available for Orthologs and Evolution for PIR58920 Gene

Paralogs for PIR58920 Gene

No data available for Paralogs for PIR58920 Gene

Variants for PIR58920 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58920 Gene

Disorders for PIR58920 Gene

No disorders were found for PIR58920 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58920 Gene

Publications for PIR58920 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58920 Gene

Sources for PIR58920 Gene

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