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Aliases for PIR58823 Gene

Subcategory (RNA class) for PIR58823 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR58823 Gene

No Aliases found

ORGUL Members for PIR58823 Gene

Previous GeneCards Identifiers for PIR58823 Gene

  • GC01M001606

No data available for External Ids for PIR58823 Gene

Summaries for PIR58823 Gene

GeneCards Summary for PIR58823 Gene

PIR58823 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58823 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58823 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58823 Gene

Genomics for PIR58823 Gene

GeneHancer (GH) Regulatory Elements for PIR58823 Gene

Promoters and enhancers for PIR58823 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J001674 Enhancer 0.4 dbSUPER 650.7 -1.0 -1043 2.4 ZBTB33 MLLT1 PIR58823 SLC35E2A LOC100288379 GC01M001675 SLC35E2B
GH01J001677 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 -3.7 -3690 2.4 MLX ARID4B SIN3A DMAP1 IRF4 ZNF48 YY1 ZNF143 ATF7 RUNX3 SLC35E2A LOC100129381 ENSG00000272106 PIR58823 GC01M001675 SLC35E2B
GH01J001680 Enhancer 0.8 ENCODE dbSUPER 0.4 -6.3 -6254 0.2 FOXA2 ZFP64 ARID4B ZIC2 RBPJ RARA SKI ZNF614 GATA3 BCL6 CDK11B GC01M001675 PIR58823 SLC35E2B
GH01J001683 Enhancer 0.6 ENCODE dbSUPER 0.4 -9.1 -9070 1.1 ZFHX2 EGR2 GC01M001675 CDK11B SLC35E2B PIR58823
GH01J001682 Enhancer 0.5 dbSUPER 0.4 -5.8 -5767 0.5 TCF12 GATA3 TAL1 CBFA2T3 RBPJ SLC35E2B GC01M001675 PIR58823
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58823 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58823 Gene

Genomic Locations for PIR58823 Gene
chr1:1,674,767-1,674,793
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr1:1,606,206-1,606,232
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR58823 Gene

Genes around PIR58823 on UCSC Golden Path with GeneCards custom track

PIR58823 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58823 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58823 Gene

Function for PIR58823 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58823 Gene

Localization for PIR58823 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58823 Gene

Pathways & Interactions for PIR58823 Gene

SuperPathways for PIR58823 Gene

No Data Available

Interacting Proteins for PIR58823 Gene

Gene Ontology (GO) - Biological Process for PIR58823 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58823 Gene

Drugs & Compounds for PIR58823 Gene

No Compound Related Data Available

Transcripts for PIR58823 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58823 Gene

No ASD Table

Relevant External Links for PIR58823 Gene

GeneLoc Exon Structure for
PIR58823

No data available for mRNA/cDNA for PIR58823 Gene

Expression for PIR58823 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58823 Gene

Orthologs for PIR58823 Gene

No data available for Orthologs and Evolution for PIR58823 Gene

Paralogs for PIR58823 Gene

No data available for Paralogs for PIR58823 Gene

Variants for PIR58823 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58823 Gene

Disorders for PIR58823 Gene

No disorders were found for PIR58823 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58823 Gene

Publications for PIR58823 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58823 Gene

Sources for PIR58823 Gene

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