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Aliases for PIR58809 Gene

Subcategory (RNA class) for PIR58809 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR58809 Gene

No Aliases found

ORGUL Members for PIR58809 Gene

Previous GeneCards Identifiers for PIR58809 Gene

  • GC17M076992
  • GC17M077001
  • GC17M077023
  • GC17M077034
  • GC17M077045
  • GC17M079028
  • GC17M079038
  • GC17M079048
  • GC17M079058
  • GC17M079069
  • GC17M079078
  • GC17M079087
  • GC17M079102

No data available for External Ids for PIR58809 Gene

Summaries for PIR58809 Gene

GeneCards Summary for PIR58809 Gene

PIR58809 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58809 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58809 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58809 Gene

Genomics for PIR58809 Gene

GeneHancer (GH) Regulatory Elements for PIR58809 Gene

Promoters and enhancers for PIR58809 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J078994 Enhancer 0.9 ENCODE dbSUPER 650.7 -0.7 -746 0.6 CTCF ZNF223 SIN3A ZNF2 RAD21 GLIS2 PATZ1 ZNF143 SMC3 ZNF444 GC17M079112 GC17M079118 PIR54418 PIR47088 PIR40001 PIR56882 PIR34009 PIR58809 PIR37172 GC17M079116
GH17J078992 Enhancer 0.6 ENCODE dbSUPER 650.7 -0.1 -120 0.2 CTCF CBFA2T3 GC17M079033 GC17M079112 GC17M079118 PIR54418 PIR47088 PIR40001 PIR56882 PIR34009 PIR58809 PIR37172
GH17J078993 Enhancer 0.3 dbSUPER 650.7 -1.6 -1621 0.7 ZBTB33 GC17M079033 GC17M079112 GC17M079116 GC17M079118 PIR40001 PIR56882 PIR34009 PIR58809 PIR47088 CANT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58809 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58809 Gene

Genomic Locations for PIR58809 Gene
chr17:78,992,624-78,992,654
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr17:76,988,706-76,988,736
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR58809 Gene

Genes around PIR58809 on UCSC Golden Path with GeneCards custom track

PIR58809 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58809 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR58809 Gene

ORGUL Member Location for PIR58809 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58809 Gene

Function for PIR58809 Gene

Phenotypes From GWAS Catalog for PIR58809 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58809 Gene

Localization for PIR58809 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58809 Gene

Pathways & Interactions for PIR58809 Gene

SuperPathways for PIR58809 Gene

No Data Available

Interacting Proteins for PIR58809 Gene

Gene Ontology (GO) - Biological Process for PIR58809 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58809 Gene

Drugs & Compounds for PIR58809 Gene

No Compound Related Data Available

Transcripts for PIR58809 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58809 Gene

No ASD Table

Relevant External Links for PIR58809 Gene

GeneLoc Exon Structure for
PIR58809

No data available for mRNA/cDNA for PIR58809 Gene

Expression for PIR58809 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58809 Gene

Orthologs for PIR58809 Gene

No data available for Orthologs and Evolution for PIR58809 Gene

Paralogs for PIR58809 Gene

No data available for Paralogs for PIR58809 Gene

Variants for PIR58809 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58809 Gene

Disorders for PIR58809 Gene

No disorders were found for PIR58809 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58809 Gene

Publications for PIR58809 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58809 Gene

Sources for PIR58809 Gene

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