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Aliases for PIR58793 Gene

Subcategory (RNA class) for PIR58793 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR58793 Gene

No Aliases found

Previous GeneCards Identifiers for PIR58793 Gene

  • GC04M135745

No data available for External Ids for PIR58793 Gene

Summaries for PIR58793 Gene

GeneCards Summary for PIR58793 Gene

PIR58793 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR58793 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR58793 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR58793 Gene

Genomics for PIR58793 Gene

GeneHancer (GH) Regulatory Elements for PIR58793 Gene

Promoters and enhancers for PIR58793 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I087194 Enhancer 0.8 Ensembl ENCODE 0.3 +39.5 39467 2.1 JUN JUNB BATF ATF2 JUND EGR1 IKZF1 ATF7 FOS RUNX3 LINC01949 PIR58793 GC05M087119 LOC101929380
GH05I087150 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.2 +83.5 83454 2.4 HDAC1 JUN TEAD4 BACH1 CEBPG FOSL1 TCF12 ZNF316 POLR2A CBFA2T2 GC05M087119 PIR58793 LOC101929380
GH05I087228 Enhancer 0.5 FANTOM5 0.4 +6.3 6341 0.7 ZBTB21 ATF2 PRDM1 RASA1 PIR58793 LINC01949 GC05M087119 LOC101929380
GH05I087230 Enhancer 0.2 ENCODE 0.8 +4.6 4630 0.1 PIR58793 LINC01949 GC05M087119 LOC101929380
GH05I087116 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.1 +115.1 115145 7 HDGF SMAD1 BMI1 BATF IRF4 ATF7 ETV6 FOS BCLAF1 IKZF2 GC05M087119 CCNH GC05P087088 PIR58793 LOC101929380
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR58793 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR58793 Gene

Genomic Locations for PIR58793 Gene
chr5:87,235,085-87,235,117
(GRCh38/hg38)
Size:
33 bases
Orientation:
Minus strand
chr4:135,744,083-135,744,116
(GRCh37/hg19)

Genomic View for PIR58793 Gene

Genes around PIR58793 on UCSC Golden Path with GeneCards custom track

PIR58793 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR58793 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR58793 Gene

ORGUL Member Location for PIR58793 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR58793 Gene

Proteins for PIR58793 Gene

Post-translational modifications for PIR58793 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR58793 Gene

Domains & Families for PIR58793 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR58793 Gene

Function for PIR58793 Gene

Phenotypes From GWAS Catalog for PIR58793 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR58793 Gene

Localization for PIR58793 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR58793 Gene

Pathways & Interactions for PIR58793 Gene

SuperPathways for PIR58793 Gene

No Data Available

Interacting Proteins for PIR58793 Gene

Gene Ontology (GO) - Biological Process for PIR58793 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR58793 Gene

Drugs & Compounds for PIR58793 Gene

No Compound Related Data Available

Transcripts for PIR58793 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR58793 Gene

No ASD Table

Relevant External Links for PIR58793 Gene

GeneLoc Exon Structure for
PIR58793

No data available for mRNA/cDNA for PIR58793 Gene

Expression for PIR58793 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR58793 Gene

Orthologs for PIR58793 Gene

No data available for Orthologs and Evolution for PIR58793 Gene

Paralogs for PIR58793 Gene

No data available for Paralogs for PIR58793 Gene

Variants for PIR58793 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR58793 Gene

Disorders for PIR58793 Gene

No disorders were found for PIR58793 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR58793 Gene

Publications for PIR58793 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR58793 Gene

Sources for PIR58793 Gene

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